New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2510081 =	71 (1.090)	4 (0.060)	4/256	NT	5.9%	coding (1650/1725 nt)	copA‑I	copper resistance protein A
	?	NC_002947	2510127 =	58 (0.920)					coding (1604/1725 nt)	copA‑I	copper resistance protein A

AACGACACCATGATGACCCACCCCATCCACCTGCACGGCATGTGGAGCGACCTGGAAGACGAGCATGGCCAGTTCCTGGTGCGCAAGCACACCGTCGATATCCCGCCCGGCAGCCGACGCACCTACCGGGTGACCGCCGACGCGCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2510230‑2510081 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcGGGATATCGACGGTGTGCTTGCGCACCAGGAACTGGCCATGCTCGTCTTCCAGGTCGCTCCACATGCCGTGCAGGTGGATGGGGTGGGTCATCATGGTGTCGTTGACCAGGGTGAT  >  NC_002947/2510127‑2510242                                                                                                                                                                                                                                                                            AACGACACCATGATGACCCACCCCATCCACCTGCACTGCATGTGGAGCGACCTGTAAGACGAGCATGGCCAGTTCCTGGTGCGCAAGCACACCGTCTATATCCCGCCCGGCAGCCGACGCACCTACCGGGTGACCGCCGACGCGCTGGG                                                                                                                       <  2:281221/149‑1                                                                                                        CGCCCGGCAGCCGACGCACCTACCGGGTGACCGCCGACGCGCTGGGCGGGATATCGACGGTGTGCTTGCGCACCAGGAACTGGCCATGCTCGTCTTCCAGGTCGCTCCACATGCCGT                                                >  5:200756/1‑117                                                                                                        CGCCCGGCAGCCGACGCACCTACCGGGTGACCGCCGACGCGCTGGGCGGGATATCGACGGTGTGCTTGCGCACCAGGAACTGGCCATGCTCGTCTTCCAGGTCGCTCCACATGCCGT                                                <  6:200756/117‑1                                                                                                         GCCCGGCAGCCGACGCACCTACCGGGTGACCGCCGACGCGCTGGGCGGGATATCGACGGTGTGCTTGCGCACCAGGAACTGGCCATGCTCGTCTTCCAGGTCGCTCCACATGCCGTGCAGGTGGATGGGGTGGGTCATCATGGTGTCGT               >  7:26705/1‑149                                                                                                                      CGCACCTACCGGGTGACCGCCGACGCGCTGGGCGGGATATCGACGGTGTGCTTGCGCACCAGGAACTGGCCATGCTCGTCTTCCATGTCGCTCCACATGCCGTGCAGGTGGATGGGGTGGGTCATCATGGTGTCGTTGACCAGGGTGAT  <  8:26705/149‑1                                                                                                                                                                                                                                                                            AACGACACCATGATGACCCACCCCATCCACCTGCACGGCATGTGGAGCGACCTGGAAGACGAGCATGGCCAGTTCCTGGTGCGCAAGCACACCGTCGATATCCCGCCCGGCAGCCGACGCACCTACCGGGTGACCGCCGACGCGCTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2510230‑2510081 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcGGGATATCGACGGTGTGCTTGCGCACCAGGAACTGGCCATGCTCGTCTTCCAGGTCGCTCCACATGCCGTGCAGGTGGATGGGGTGGGTCATCATGGTGTCGTTGACCAGGGTGAT  >  NC_002947/2510127‑2510242

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.