New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2521191	62 (0.950)	4 (0.070)	4/246	NT	6.4%	coding (2442/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein
	?	NC_002947	= 2521226	59 (0.970)					coding (2477/4446 nt)	PP_2212	leucine‑rich repeat‑containing protein

TCTATCAGGCGCCTCGGTAGCGGCGGGCGAACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGA‑GCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2521036‑2521191 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcactgCCCACCAGTTGCATCGCTGCCCGCTGCTCTGATGTCAGTGCGGCA  <  NC_002947/2521226‑2521182                                                                                                                                                                                                            TCTATCAGGCGCCTCGGTAGCGGCGGGCGAACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGA‑GCCGGGATGTATCTTCGAGGCGCTTTCTGC                                                      >  2:235347/1‑149   TATCAGGCGCCTCGGTAGCGGCGGGCGAACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGGCCGGGATGTATCTTCGAGGCGCTTTCTGCC                                                     <  1:242895/149‑1     TCAGGCGCCTCGGTAGCGGCGGGCGAACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGA‑GCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCA                                                  >  6:85341/1‑149     TCAGGCGCCTCGGTAGCGGCGGGCGAACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGA‑GCCGGGATGTATCTTCGAGGCGCTTTCTGCC                                                     <  1:235347/146‑1                               ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGA‑GCCGGGATGTATCTTCGAGGCGCTTTCTGCCG                                                    >  5:310204/1‑121                               ACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGA‑GCCGGGATGTATCTTCGAGGCGCTTTCTGCCG                                                    <  6:310204/121‑1                                CCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGA‑GCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGCCCACCAGTTGCATCGCTGCCCGC                       >  1:377776/1‑149                                           AGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGA‑GCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGCCCACCAGTTGCATCGCTGCCCGCTGCTCTGATG             <  2:377776/148‑1                                                    GTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGA‑GCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGCCCACCAGTTGCATCGCTGCCCGCTGCTCTGATGTCAGTGCGG    <  1:74210/148‑1                                                     TCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGA‑GCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGCCCACCAGTTGCATCGCTGCCCGCTGCTCTGATGTCAGTGCGGCA  <  6:71583/149‑1                                                                                                                                                                                                            TCTATCAGGCGCCTCGGTAGCGGCGGGCGAACCGAGGCAAGAAGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGA‑GCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2521036‑2521191 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcactgCCCACCAGTTGCATCGCTGCCCGCTGCTCTGATGTCAGTGCGGCA  <  NC_002947/2521226‑2521182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.