New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 252119162 (0.950)4 (0.070) 4/246 NT 6.4% coding (2442/4446 nt) PP_2212 leucine‑rich repeat‑containing protein
?NC_002947 = 2521226 59 (0.970)coding (2477/4446 nt) PP_2212 leucine‑rich repeat‑containing protein

AGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAGGGCGTCGCATGGACGATGGGCGCGTGGGATACCC  >  NC_002947/2521078‑2521373
                                                                                                                                                    |                                                                                                                                                   
agaaTAGTGGTCACGCATGAAGGCAGGGTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTCTCGCTGACGAGCCGGGATGTAGCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTggg                                                                                                                                                     <  1:173952/149‑1 (MQ=255)
            aGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTgcggcggc                                                                                                                                         <  1:46425/149‑1 (MQ=255)
               cATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAg                                                                                                                                      <  4:3781/149‑1 (MQ=255)
                    aGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAAc                                                                                                                                 >  2:408646/1‑149 (MQ=255)
                          ctctCTGATCTACAACGGGCCCGGTGTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTg                                                                                                                           <  4:111935/146‑1 (MQ=255)
                               tGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTgag                                                                                                                         >  1:232396/1‑146 (MQ=255)
                                 aTCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGc                                                                                                                     <  7:10341/148‑1 (MQ=255)
                                     aCAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCTCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAAGTGGTGGGCAGTgcggcggc                                                                                                                                         <  8:189394/124‑1 (MQ=255)
                                     aCAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTgcggcggc                                                                                                                                         >  7:189394/1‑124 (MQ=255)
                                     aCAACGGGTCAGGTTTGCCACACGTGTTTATAGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTg                                                                                                                >  1:132670/1‑149 (MQ=255)
                                      ctaCGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGGCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTg                                                                                                                <  6:210798/146‑1 (MQ=255)
                                      cAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTc                                                                                                                  <  1:408646/146‑1 (MQ=255)
                                                   ttGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTgcggcgg                                                                                                                                          <  2:19186/109‑1 (MQ=255)
                                                   ttGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTgcggcgg                                                                                                                                          >  1:19186/1‑109 (MQ=255)
                                                      ccACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTAc                                                                                               >  2:322784/1‑149 (MQ=255)
                                                        acacGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTAcc                                                                                              >  4:109311/1‑148 (MQ=255)
                                                          acGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCAt                                                                                           <  8:126814/149‑1 (MQ=255)
                                                          acGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCAt                                                                                           >  5:170650/1‑149 (MQ=255)
                                                           cGTGTTTATCGCTGACGAGCCGGTATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCAtt                                                                                          <  2:132670/149‑1 (MQ=255)
                                                            gtgtTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTg                                                                                         >  3:332613/1‑149 (MQ=255)
                                                                  aTCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGTGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGatat                                                                                   >  5:277881/1‑149 (MQ=255)
                                                                      cTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGtt                                                                                                        <  1:109159/124‑1 (MQ=255)
                                                                      cTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGtt                                                                                                        >  2:109159/1‑124 (MQ=255)
                                                                      cTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATcgcg                                                                               <  4:115522/149‑1 (MQ=255)
                                                                           gAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATGAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCAt                                                                          >  5:196517/1‑149 (MQ=255)
                                                                           gAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTgaga                                                                                                                        <  7:335109/103‑1 (MQ=255)
                                                                           gAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTgaga                                                                                                                        >  8:335109/1‑103 (MQ=255)
                                                                           gAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCAGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCAt                                                                          >  2:314079/1‑149 (MQ=255)
                                                                               cGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCgcgcgc                                                                            >  6:81944/1‑143 (MQ=255)
                                                                               cGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCgcgcgc                                                                            <  5:81944/143‑1 (MQ=255)
                                                                                gggATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCg                                                                     <  5:85341/149‑1 (MQ=255)
                                                                                     gTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAg                                                                                                                                      >  2:269895/1‑79 (MQ=255)
                                                                                     gTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAg                                                                                                                                      <  1:269895/79‑1 (MQ=255)
                                                                                     gTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATcgcgc                                                                              <  3:117570/135‑1 (MQ=255)
                                                                                     gTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATcgcgc                                                                              >  4:117570/1‑135 (MQ=255)
                                                                                      tATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGc                                                               <  4:332613/149‑1 (MQ=255)
                                                                                       aTCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGc                                                               >  4:27596/1‑148 (MQ=255)
                                                                                       aTCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGc                                                               >  5:337329/1‑148 (MQ=255)
                                                                                       aTCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAAACACCGGCGGAAGAAGCTACTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGc                                                               >  1:335592/1‑148 (MQ=255)
                                                                                        tCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTAc                                                                                               >  6:26685/1‑115 (MQ=255)
                                                                                        tCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTAc                                                                                               <  5:26685/115‑1 (MQ=255)
                                                                                        tCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGc                                                               >  8:50225/1‑147 (MQ=255)
                                                                                        tCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGAGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGc                                                               >  1:356651/1‑147 (MQ=255)
                                                                                          ttCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCa                                                             >  8:188007/1‑147 (MQ=255)
                                                                                            cGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCagag                                                          <  3:109311/148‑1 (MQ=255)
                                                                                            cGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCa                                                             <  2:232396/145‑1 (MQ=255)
                                                                                            cGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCa                                                             <  3:337877/145‑1 (MQ=255)
                                                                                            cGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCa                                                             <  6:196517/145‑1 (MQ=255)
                                                                                             gAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCagag                                                          >  4:211562/1‑147 (MQ=255)
                                                                                                    tttCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGcc                                                 >  4:362629/1‑149 (MQ=255)
                                                                                                    gccatGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGc                                                  <  7:58539/144‑1 (MQ=255)
                                                                                                        tGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGcagtgcggcagaaagcgcctcgaagatacatcccggctcgtcagcgataaacacgtgtggcaaacctgacccgttgtagatcagaaacctgccttcatgcctga                                             <  6:71583‑M2/149‑105 (MQ=255)
                                                                                                         gCCGCACTGACATCAGAGCAGCGGGAAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTa                                                                                                <  4:71839/97‑1 (MQ=255)
                                                                                                         gCCGCACTGACATCAGAGCAGCGGGAAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTa                                                                                                >  3:71839/1‑97 (MQ=255)
                                                                                                          ccGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGcagtgcggcagaaagcgcctcgaagatacatcccggctcgtcagcgataaacacgtgtggcaaacctgacccgttgtagatcagaaacctgccttcatgcctgac                                            <  1:74210‑M2/148‑106 (MQ=255)
                                                                                                           cGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTc                                           >  8:332151/1‑148 (MQ=255)
                                                                                                                  aCATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAg                                    <  6:170650/148‑1 (MQ=255)
                                                                                                                   cATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGcagtgcggcagaaagcgcctcgaagatacatcccggctcgtcagcgataaacacgtgtggcaaacctgacccgttgtagatcagaaacctgccttcatgcctgaccactattct                                   <  2:377776‑M2/148‑115 (MQ=255)
                                                                                                                   cATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAggg                                  <  3:362629/149‑1 (MQ=255)
                                                                                                                    aTCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAGGGc                                 >  5:203301/1‑149 (MQ=255)
                                                                                                                      cAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAGGGCGt                               >  5:377645/1‑149 (MQ=255)
                                                                                                                        gagCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCCTCTGGCCAGCCGAGCat                                                    <  6:215839/126‑2 (MQ=255)
                                                                                                                        gagCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCCTCTGGCCAGCCGAGCat                                                    >  5:215839/1‑125 (MQ=255)
                                                                                                                           cagcGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAGGGCGTCGCAt                          >  8:205105/1‑149 (MQ=255)
                                                                                                                             gcaggCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAGGGCGTCGCATgg                        <  1:314079/146‑1 (MQ=255)
                                                                                                                             gcGGGCAGCGATGCAACTGGTGGGcagtgcggcagaaagcgcctcgaagatacatcccggctcgtcagcgataaacacgtgtggcaaacctgacccgttgtagatcagaaacctgccttcatgcctgaccactattcttcttgcctcgg                        >  1:377776‑M2/1‑24 (MQ=255)
                                                                                                                                          cAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAGGGCGTCGCATGGACGATGGGCGCGt           <  6:337329/149‑1 (MQ=255)
                                                                                                                                           aaCTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAGGGCGTCGCATGGTCGATGGGCGCGTg          <  3:27596/149‑1 (MQ=255)
                                                                                                                                            aCTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAGGGCGTCGCATGGACGATGGGCGCGTgg         >  4:389223/1‑149 (MQ=255)
                                                                                                                                                gtggGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAGGGCGTCGCATGGACGATGGGCGCGTGGGa       <  6:377645/147‑1 (MQ=255)
                                                                                                                                                gtggGCAGTGCGGAGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAGGGCGTCGCATGGACGATGGGCGCGTGGGATa     <  2:356651/149‑1 (MQ=255)
                                                                                                                                                  gggCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAGGGCGTCGCATGGACGATGGGCGCGTGGGATAcc   >  6:74133/1‑149 (MQ=255)
                                                                                                                                                   ggCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCGGGCTCAATCCAGGGCGTCGCAGGGCCGATGGGCGCGTGGGATAccc  >  6:320617/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AGAATAGTGGTCAGGCATGAAGGCAGGTTTCTGATCTACAACGGGTCAGGTTTGCCACACGTGTTTATCGCTGACGAGCCGGGATGTATCTTCGAGGCGCTTTCTGCCGCACTGACATCAGAGCAGCGGGCAGCGATGCAACTGGTGGGCAGTGCGGCGGCGAGGCAACTGCGTGAGAAGCTTCTGGCGCGGTTACCCGCTACCCATTGGGATATCGCGCGCATGCTCGGCTGGCCAGAGGAGCAGGCCTGGCTCAATCCAGGGCGTCGCATGGACGATGGGCGCGTGGGATACCC  >  NC_002947/2521078‑2521373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.