New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2560802 | 56 (0.860) | 3 (0.050) | 3/250 | NT | 5.5% | coding (629/786 nt) | PP_2244 | TauE‑like transmembrane protein |
? | NC_002947 | = 2560846 | 50 (0.810) | coding (585/786 nt) | PP_2244 | TauE‑like transmembrane protein |
CAGCTTGTAACCGATCAGCAGCAGCATCGTTGCCAGGCAAGGGCGCAGCACGCGGTCGGAGATCCGCCCGGTGAGGTGGCTACCCAGGTAGATGCCTGGCAGCGAGCCCAGCAGCAGGTAGCCCAGCAGCGACCAATCCATGTTGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2560654‑2560802 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcccaCGCCGTGCCACTGACCTTGGTAGCGGGCCTCGGCCACGCGGGCATGGGCAACA < NC_002947/2560846‑2560794 CAGCTTGTAACCGATCAGCAGCAGCATCGTTGCCAGGCAAGGGCGCAGCACGCGGTCGGAGATCCGCCCGGTGAGGTGGCTACCCAGGTAGATGCCTGGCAGCGAGCCCAGCAGCAGGTAGCCCAGCAGCGACCAATCCATGTTGCCCA > 4:271598/1‑149 GCGCAGCACGCGGTCGGAGATCCGCCCGGTGAGGTGGCTACCCAGGTAGATGCCTGGCAGCGAGCCCAGCAGCAGGTAGCCCAGCAGCGACCAATCCATGTTGCCCACGCCGTGCCACTGACCTTGGTAGCGGGCCTCGGCCACGCGGG > 8:50937/1‑149 CACGCGGTCGGAGATCCGCCCGGTGAGGTGGCTACCCAGGTAGATGCCTGGCAGCGAGCCCAGCAGCAGGTAGCCCAGCAGCGACCAATCCATGTTGCCCACGCCGTGCCACTGACCTTGGTAGCGGGCCTCGGCCACGCGGGCATGGG < 7:50937/149‑1 GGTCGGAGATCCGCCCGGTGAGGTGGCTACCAAGGTAGATGCCTGGCAGCGAGCCCAGCAGCAGGTAGCCCAGCAGCGACCAATCCATGTTGCCCACGCCGTGCCACTGACCTTGGTAGCGGGCCTCGGCCACGCGGGCATGGGCAACA < 1:223192/149‑1 CAGCTTGTAACCGATCAGCAGCAGCATCGTTGCCAGGCAAGGGCGCAGCACGCGGTCGGAGATCCGCCCGGTGAGGTGGCTACCCAGGTAGATGCCTGGCAGCGAGCCCAGCAGCAGGTAGCCCAGCAGCGACCAATCCATGTTGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2560654‑2560802 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgcccaCGCCGTGCCACTGACCTTGGTAGCGGGCCTCGGCCACGCGGGCATGGGCAACA < NC_002947/2560846‑2560794 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |