| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2562661 = | 72 (1.110) | 4 (0.060) | 4/252 | NT | 5.5% | coding (399/1137 nt) | dauA | FAD‑dependent catabolic D‑arginine dehydrogenase |
| ? | NC_002947 | 2562688 = | 68 (1.100) | coding (426/1137 nt) | dauA | FAD‑dependent catabolic D‑arginine dehydrogenase | |||||
CACCTGCCACACGTCGTCCAGGTAGCAGGCCTGGATCAGCTCGGCGTTGCAGCGCAGTTCACCGCCGGCAGTGCGATAACCACGCAAGAAGCCTTGGTGCAAGGCATGTACGTCAAGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2562814‑2562661‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCGCTGCAACGCCGAGCTGATCCAGGCCTGCTACCTGGACGACGTGTGGCAGGTGGAGTTGGCTGATGGCAGCCGC > NC_002947/2562688‑2562835 CACCTGCCACACGTCGTCCAGGTAGCAGGCCTGGATCAGCTCGGCGTTGCAGCGCAGTTCACCGCCGGCAGTGCGATAACCACGCAAGAAGCCTTGGTGCAAGGCATGTACGTCAAGGTCCATCGCACCTGGCTCAAGCACCGCGCCGG > 6:35330/1‑149 CTGCCACACGTCGTCCAGGTAGCAGGCCTGGATCAGCTCGGCGTTGCAGCGCAGTTCACCGCCGGCAGTGCGATAACCACGCAAGAAGCCTTGGTGCAAGGCATGTACGTCAAGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGC > 4:400149/1‑147 GCCACACGTCGTCCAGGTAGCAGGCCTGGATCAGCTCGGCGTTGAAGCGCAGTTCACCGCCGGCAGTGCGATAACCACGCAATAAGCCTTGGTGCAAGGCATGTACTTCAAGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGCCAGG > 6:290045/1‑149 CGTTGCAGCGCAGTTCACCGCCGGCAGTGCGATAACCACGCAAGAAGCCTTGGTGCAAGGCATGTACGTCAAGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGC > 1:155815/1‑106 CGTTGCAGCGCAGTTCACCGCCGGCAGTGCGATAACCACGCAAGAAGCCTTGGTGCAAGGCATGTACGTCAAGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGC < 2:155815/106‑1 GCACCTGGCTCAAGCACCGCGCCGGCCAGGTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCGCT < 5:115313/107‑1 GCACCTGGCTCAAGCACCGCGCCGGCCAGGTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCGCT > 6:115313/1‑107 CACCTGGCTCAAGCACCGCGCCGGCCAGGTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCG < 7:354951/104‑1 CACCTGGCTCAAGCACCGCGCCGGCCAGGTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCG > 8:354951/1‑104 CCAGGTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCGCTGCAACGCCGAGCTGATCCAGGCCTGCTACCTGGACGACGTGTGGCAGGTGGAGTTGGCTGATGGCAG > 2:305858/1‑149 GTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCGCTGCAACGCCGAGCTGATCCAGGCCTGCTACCTGGACGACGTGTGGCAGGTGGAGTTGGCTGATGGCAGCCGC < 5:300953/149‑1 CACCTGCCACACGTCGTCCAGGTAGCAGGCCTGGATCAGCTCGGCGTTGCAGCGCAGTTCACCGCCGGCAGTGCGATAACCACGCAAGAAGCCTTGGTGCAAGGCATGTACGTCAAGGTCCATCGCACCTGGCTCAAGCACCGCGCCGGCCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2562814‑2562661‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggTGCGATGGACCTTGACGTACATGCCTTGCACCAAGGCTTCTTGCGTGGTTATCGCACTGCCGGCGGTGAACTGCGCTGCAACGCCGAGCTGATCCAGGCCTGCTACCTGGACGACGTGTGGCAGGTGGAGTTGGCTGATGGCAGCCGC > NC_002947/2562688‑2562835 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |