New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 263412243 (0.660)4 (0.060) 4/254 NT 8.4% coding (584/1872 nt) PP_2304 peptidyl‑prolyl cis‑trans isomerase D
?NC_002947 = 2634150 46 (0.730)coding (612/1872 nt) PP_2304 peptidyl‑prolyl cis‑trans isomerase D

CGGTCGCATGCAGTTCCGCGAGATGCTCGGCGAGGAAATGCTCATCGGCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2633973‑2634122
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgacCTTGACTGCGGCCGGGTCGGCCTTGAACGTCAGGGAGGCGAAGTCGCGGGTCTGCTTCTCCAGGCGAGCGAAGGCATCGACCTGTTGATCGGTGACGAAGCTGCTGCCGGCCAGGCCGGTGCGCAGTTGGCCGATGAGCATTTCCTC  <  NC_002947/2634150‑2634004
                                                                                                                                                                                                                                                                                                         
CGGTCGCATGCAGTTACGCGAGATGCTCCGCGAGGAAATGCTCATCTGCCAACTGCGCACAGGCATGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGA                                                                                                                                                      >  1:227102/1‑149
                                         TCATCGGCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACCTTGACTGCGGCCGGGTCGGCCTTGAACGTCAGGG                                                                                                                  >  1:387658/1‑144
                                         TCATCGGCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACCTTGACTGCGGCCGGGTCGGCCTTGAACGTCAGGG                                                                                                                  <  2:387658/144‑1
                                               GCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACCTTGACTGCGGCCGGGTCGGCCTTGAACGTCAGGGAG                                                                                                                >  5:58020/1‑140
                                               GCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACCTTGACTGCGGCCGGGTCGGCCTTGAACGTCAGGGAG                                                                                                                <  6:58020/140‑1
                                                                                                                                                    ACCTTGACTGCGGCCGGGTCGGCCTTGAACGTCAGGGAGGCGAAGTCGCGGGTCTGCTTCTCCAGGCGAGCGAAGGCATCGACCTGTTGATCGGTGACGAAGCTGCTGCCGGCCAGGCCGGTGCGCAGTTGGCCGATGAGCATTTCCTC  <  8:70297/149‑1
                                                                                                                                                                                                                                                                                                         
CGGTCGCATGCAGTTCCGCGAGATGCTCGGCGAGGAAATGCTCATCGGCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2633973‑2634122
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgacCTTGACTGCGGCCGGGTCGGCCTTGAACGTCAGGGAGGCGAAGTCGCGGGTCTGCTTCTCCAGGCGAGCGAAGGCATCGACCTGTTGATCGGTGACGAAGCTGCTGCCGGCCAGGCCGGTGCGCAGTTGGCCGATGAGCATTTCCTC  <  NC_002947/2634150‑2634004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.