New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2634122	43 (0.660)	4 (0.060)	4/254	NT	8.4%	coding (584/1872 nt)	PP_2304	peptidyl‑prolyl cis‑trans isomerase D
	?	NC_002947	= 2634150	46 (0.730)					coding (612/1872 nt)	PP_2304	peptidyl‑prolyl cis‑trans isomerase D

GAGGAAATGCTCATCGGCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATCAGGTCAAAGTGACTGACGAAGAGCTCAAGGCC  >  NC_002947/2634004‑2634294                                                                                                                                                   |                                                                                                                                                 gAGGAAATGCTCATCGGCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGgt                                                                                                                                                <  8:70297‑M2/149‑3 (MQ=255)     aaaTGCTCATCGGCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGc                                                                                                                                            <  1:238951/149‑1 (MQ=255)         gCTCATCGGCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGcgac                                                                                                                                         >  3:352971/1‑148 (MQ=255)          cTCATCGGCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGcgacg                                                                                                                                        >  2:171037/1‑148 (MQ=255)             aTCGGCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGaa                                                                                                                                      >  6:323303/1‑147 (MQ=255)              tCGGCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAagag                                                                                                                                   <  2:313078/149‑1 (MQ=255)                 gCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGt                                                                                                                                 >  7:311939/1‑148 (MQ=255)                   cAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTc                                                                                                                                >  5:5735/1‑147 (MQ=255)                   cAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCaa                                                                                                                              <  6:264853/149‑1 (MQ=255)                         cgcACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCa                                                                                                                        <  1:180277/149‑1 (MQ=255)                            aCCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACACGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTa                                                                                                                     >  7:331656/1‑149 (MQ=255)                                 ccTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGAcc                                                                                                                <  8:311939/149‑1 (MQ=255)                                  cTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCa                                                                                                               <  5:323303/149‑1 (MQ=255)                                   tGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGCCGAAGAGGTCAAGGCGCACTACGACCAg                                                                                                              >  8:107015/1‑149 (MQ=255)                                     gCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCa                                                                                                            >  2:18415/1‑149 (MQ=255)                                       cGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACg                                                                                                          >  2:236832/1‑149 (MQ=255)                                         gcagcaGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGcc                                                                                                        <  1:236832/149‑1 (MQ=255)                                            gcagcTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAg                                                                                                     <  6:5735/149‑1 (MQ=255)                                            gcagcTTCGGCACCGCTCAACAGGGCGATGCCTTCGCTCGCCTGGAGAAGCCGACCCGCGACTTCGCCTCCCTGACGTACAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAg                                                                                                     <  4:355791/149‑1 (MQ=255)                                                cTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGt                                                                                                 >  6:200383/1‑149 (MQ=255)                                                    gTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCAt                                                                                             <  7:107015/149‑1 (MQ=255)                                                     tCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGGCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATg                                                                                            <  4:164679/149‑1 (MQ=255)                                                      cACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGc                                                                                                             <  7:220042/131‑1 (MQ=255)                                                      cACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGc                                                                                                             >  8:220042/1‑131 (MQ=255)                                                        ccGATCAACAGGTCGATGCCTTCGCTTGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGGCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCAGTACGACCAGCACGCCAAGGAGTTCATGTCg                                                                                         <  4:152926/149‑1 (MQ=255)                                                              aaCAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGAc                                                                                   <  5:417601/149‑1 (MQ=255)                                                                           cTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATc                                                                       >  1:108301/1‑148 (MQ=255)                                                                           cTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATc                                                                       >  2:306239/1‑148 (MQ=255)                                                                               gctcgcCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACt                                                                   <  5:66821/148‑1 (MQ=255)                                                                                 tcgcCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACa                                                                >  6:186392/1‑149 (MQ=255)                                                                                        gagaAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAg                                                           <  5:200383/147‑1 (MQ=255)                                                                                                       gACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCttt                                          <  7:70297/149‑1 (MQ=255)                                                                                                          ttCGACTCCCTGACGTTCAAGGCCGACCAGGCCGCAGTCAAGGTCAGCGCCGAAGAGGACAAGGCGAACTACGACCCGCACGCCAAGGCGCTCATGTCGCCTGACCAGGTCGTGATCGACTACATCCAGAGGAAGAAGTCGGCTttatt                                       >  8:68476/1‑149 (MQ=255)                                                                                                             gCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGa                                    <  4:352971/149‑1 (MQ=255)                                                                                                             gCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGa                                    >  5:193298/1‑149 (MQ=255)                                                                                                               cTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGgtcagggaggcgaagtcgcgggtctgcttctccaggcgagcgaaggcatcgacctgttgatcggtgacgaagctgctgccggccaggccggtgcgcagttggc                                           <  6:58020‑M2/140‑104 (MQ=255)                                                                                                               cTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGgtcagggaggcgaagtcgcgggtctgcttctccaggcgagcgaaggcatcgacctgttgatcggtgacgaagctgctgccggccaggccggtgcgcagttggc                                           >  5:58020‑M2/1‑37 (MQ=255)                                                                                                               cTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATc                                  <  6:193298/149‑1 (MQ=255)                                                                                                                tCCCTGACGTTCAAGTCCGACCCGGCCGCATTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGTCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATCa                                 <  8:331656/149‑1 (MQ=255)                                                                                                                 cccTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGgtcagggaggcgaagtcgcgggtctgcttctccaggcgagcgaaggcatcgacctgttgatcggtgacgaagctgctgccggccaggccggtgcgcagttggccgatga                                     >  1:387658‑M2/1‑35 (MQ=255)                                                                                                                 cccTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGgtcagggaggcgaagtcgcgggtctgcttctccaggcgagcgaaggcatcgacctgttgatcggtgacgaagctgctgccggccaggccggtgcgcagttggccgatga                                     <  2:387658‑M2/144‑110 (MQ=255)                                                                                                                   cTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATCAGGt                              >  5:203692/1‑149 (MQ=255)                                                                                                                     gACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATCAGGTc                             >  8:274612/1‑148 (MQ=255)                                                                                                                         ttCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCgg                                              >  5:263322/1‑127 (MQ=255)                                                                                                                         ttCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCgg                                              <  6:263322/127‑1 (MQ=255)                                                                                                                            aaGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATCAGGTCAAAGtga                      <  1:18415/148‑1 (MQ=255)                                                                                                                             aGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATCAGGTCAAAGtgact                    >  5:218178/1‑149 (MQ=255)                                                                                                                              ggCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATCAGGTCAAAGtgact                    >  1:336143/1‑148 (MQ=255)                                                                                                                                       ggCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATCAGGTCAAAGTGACTGACGAAGAGc          >  4:354166/1‑149 (MQ=255)                                                                                                                                           gCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGATTTCTTCGATCAGGTCAAAGTGACTGACGAAGAGCTc        >  5:274971/1‑147 (MQ=255)                                                                                                                                             aGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATCAGGTCAAAGTGACTGACGAAGAGCTCAAgg    <  6:218178/149‑1 (MQ=255)                                                                                                                                              gTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTga                                                       <  7:111030/97‑1 (MQ=255)                                                                                                                                              gTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTga                                                       >  8:111030/1‑97 (MQ=255)                                                                                                                                              gTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATCAGGTCAAAGTGACTGACGAAGAGCTCaacga   >  5:9495/1‑146 (MQ=255)                                                                                                                                               tCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATCAGGTCAAAGTGACTGACGAAGAGCTCAAGGcc  <  1:171037/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 GAGGAAATGCTCATCGGCCAACTGCGCACCGGCCTGGCCGGCAGCAGCTTCGTCACCGATCAACAGGTCGATGCCTTCGCTCGCCTGGAGAAGCAGACCCGCGACTTCGCCTCCCTGACGTTCAAGGCCGACCCGGCCGCAGTCAAGGTCAGCGACGAAGAGGTCAAGGCGCACTACGACCAGCACGCCAAGGAGTTCATGTCGCCTGACCAGGTCGTGATCGACTACATCGAGCTGAAGAAGTCGGCTTTCTTCGATCAGGTCAAAGTGACTGACGAAGAGCTCAAGGCC  >  NC_002947/2634004‑2634294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.