New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2692656	63 (0.970)	4 (0.060)	4/252	NT	6.1%	coding (280/504 nt)	PP_2360	type I pili subunit CsuA/B
	?	NC_002947	= 2692684	62 (1.000)					coding (308/504 nt)	PP_2360	type I pili subunit CsuA/B

GTGTCACCAGCTACGGCACGCTCGATTATGGCTCGCAGTCGGCGCTGTCCACGGGGCTGCTCAGCACATCGCTGGGTGGTTCTA‑CCGTGACGTTCCAGTGCACGCCTGGCGTGGCCATGAGCATGAGCCTGGACGGCGGGCAAAACAGTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2692504‑2692656 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgccaCTGGTGCGCTTCAGGTTGCGTGTGCCACTGGCACTGTTTTGCCCGCCGTCCAGGCTCATGCTCATGGCCACGCCAGGCGTGCACTGGAACGTCACGGTAGAACCACCCAGCGATGTGCTGAGCAGCCCCGTGGACAGCGCCGACTGCG  <  NC_002947/2692684‑2692537                                                                                                                                                                                                                                                                                                                GTGTCACCAGCTACGGCACGCTCGATTATGGCTCGCAGTCGGCGCTGTCCACGGGGCTGCTCAGCACATCGCTGGGTGGTTCTA‑CCGTGACGTTCCAGTGCACGCCTGGCGTGGCCATGAGCATGAGCCTGGACGGCGGGCAAAACAGT                                                                                                                                                          <  3:321053/149‑1  TGTCACCAGCTACGGCACGCTCGATTATGGCTCGCAGTCGGCGCTGTCCACGGGGCTGCTCAGCTCATCGCTGGGTGGTTCTA‑CCGTGACGTTCCAGTGCACGCCTGGCGTGGCCATGAGCATGAGCCTGGACGGCGGGCAAAACAGTG                                                                                                                                                         <  2:83461/149‑1  TGTCACCAGCTACGGCACGCTCGATTATGGCTCGCAGTCGGCGCTGTCCACGGGGCTGCTCAGCACATCGCTGGGTGGTTCTACCCTTGACGTTCCAGTGCACGCCTGGCGTGGCCATGAGCATGAGCCTGGACGGCGGGCAAAACAGT                                                                                                                                                          <  1:121186/149‑1                                 TCGCAGTCGGCGCTGTCCACGGGGCTGCTCAGCACATCGCTGGGTGGTTCTA‑CCGTGACGTTCCAGTGCACGCCTGGCGTGGCCATGAGCATGAGCCTGGACGGCGGGCAAAACAGTGCCACTGGTGCGCTTCAGGTTGCGTGTGCCAC                                                                                                                          >  7:141567/1‑149                                       tctGCGCTGTCCACGGGGCTGCTCAGCACATCGCTGGGTGGTTCTA‑CCGTGACGTTCCAGTGCACGCCTGGCGTGGCCATGAGCATGAGCCTGGACGGCGGGCAAAACAGTGCCACTGGTGCGCTTCAGGTTGCGTGTGCCACTGGCAC                                                                                                                    <  8:141567/146‑1                                                       GGCTGCTCAGCACATCGCTGGGTGGTTCTA‑CCGTGACGTTCCAGTGCACGCCTGGCGTGGCCATGAGCATGAGCCTGGACGGCGGGCAAAACAGTGCCACTGGTGCGCTTCAGGTTGCGTGTGCCACTGGCACTGTTTTG                                                                                                             >  5:300316/1‑140                                                       GGCTGCTCAGCACATCGCTGGGTGGTTCTA‑CCGTGACGTTCCAGTGCACGCCTGGCGTGGCCATGAGCATGAGCCTGGACGGCGGGCAAAACAGTGCCACTGGTGCGCTTCAGGTTGCGTGTGCCACTGGCACTGTTTTG                                                                                                             <  6:300316/140‑1                                                                                                                                                      TGCCACTGGTGCGCTTCAGGTTGCGTGTGCCACTGGCACTGTTTTGCCCGCCGTCCAGGCTCATGCTCATGGCCACGCCAGGCGTGCACTGGAACGTCACGGTAGAACCACCCAGCGATGTGCTGAGCAGCCCCGTGGACAGCGCCGAC      >  3:102516/1‑149                                                                                                                                                          ACTGGTGCGCTTCAGGTTGCGTGTGCCACTGGCACTGTTTTGCCCGCCGTCCAGGCTCATGCTCATGGCCACGCCAGGCGTGCACTGGAACGTCACGGTAGAACCACCCAGCGATGTGCTGAGCAGCCCCGTGGACAGCGCCGACTGCG  <  4:102516/149‑1                                                                                                                                                          ACTGGTGCGCTTCAGGTTGCGTGTGCCACTGGCACTGTTTTGCCCGCCGTCCAGGCTCATGCTCATGGCCACGCCAGGCGTGCACTGGAACGTCACGGTAGAACCACCCAGCGATGTGCTGAGCAGCCCCGTGGACAGCGCCGACTGC   >  2:275338/1‑148                                                                                                                                                                                                                                                                                                                GTGTCACCAGCTACGGCACGCTCGATTATGGCTCGCAGTCGGCGCTGTCCACGGGGCTGCTCAGCACATCGCTGGGTGGTTCTA‑CCGTGACGTTCCAGTGCACGCCTGGCGTGGCCATGAGCATGAGCCTGGACGGCGGGCAAAACAGTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2692504‑2692656 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgccaCTGGTGCGCTTCAGGTTGCGTGTGCCACTGGCACTGTTTTGCCCGCCGTCCAGGCTCATGCTCATGGCCACGCCAGGCGTGCACTGGAACGTCACGGTAGAACCACCCAGCGATGTGCTGAGCAGCCCCGTGGACAGCGCCGACTGCG  <  NC_002947/2692684‑2692537

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.