| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2823827 | 47 (0.720) | 4 (0.060) | 4/250 | NT | 8.4% | intergenic (+2/‑98) | PP_5528/iorA‑I | hypothetical protein/isoquinoline 1‑oxidoreductase subunit alpha |
| ? | NC_002947 | = 2823848 | 43 (0.700) | intergenic (+23/‑77) | PP_5528/iorA‑I | hypothetical protein/isoquinoline 1‑oxidoreductase subunit alpha | |||||
GTGCTGAGTGTATTAGCCCCGCTGACCCGTGATCTGAGTTTCCCGGTAATGGTGCTGGTGGAAGTGCTGGTATTGGTGCCTGTCACCCAGCTTATTTCCTTTCCATTGGCCGGGTGGCTGGTTGCCCGTTTAAGGCGAATAGATTCGTGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2823676‑2823827‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgaggCAGACTTAAACAGCGTCATGCCCTCACGAATCTATTCGCCTTAAACGGGCAACCAGCCACCCGGCCAATGGAAAGGAAATAAGCTGGGTGACAGGCACCAATACCAGCACTTCCACCAGCACCATTACCGGGAAACTCAGATCACGGG < NC_002947/2823848‑2823701 GTGCTGAGTGTATTAGCCCCGCTGACCCGTGATCTGAGTTTCCCGGTAATGGTGCTGGTGGAAGTGCTGGTATTGGTGCCTGTCACCCAGCTTATTTCCTTTCCATTGGCCGGGTGGCTGGTTGCCCGTTTAAGGCGAATAGATTCGT < 4:386390/148‑1 TGCTGAGTGTATTAGCCCCGCTGACCCGTGATCTGAGTTTCCCGGTAATGGTGCTGGTGGAAGTGCTGGTATTGGTGCCTGTCACCCAGCTTATTTCCTTTCCATTGGCCGGGTGGCTGGTTGCCCGTTTAAGGCGAATAGATTCGTGA < 7:132156/149‑1 TGCTGAGTGTATTAGCCCCGCTGACCCGTGATCTGAGTTTCCCGGTAATGGTGCTGGTGGAAGTGCTGGTATTGGTGCCTGTCACCCAGCTTATTTCCTTTCCATTGGCCGGGTGGCTGGTTGCCCGTTTAAGGCGAATAGATTCGTGA < 4:102272/149‑1 GCTGAGTGTATTAGCCCCGCTGACCCGTGATCTGAGTTTCCCGGTAATGGAGCTGGTGGAAGTGCTGGTATTGGTGCCTGTCACCCAGCTTATTTCCTTTCCATTGGCCGGGTGGCTGGTTGCCCGTTTAAGGCGAATAGATTCGTGAG > 1:305352/1‑149 CCGTGATCTGAGTTTCCCGGTAATGGTGCTGGTGGAAGTGCTGGTATTGGTGCCTGTCACCCAGCTTATTTCCTTTCCATTGGCCGGGTGGCTGGTTGCCCGTTTAAGGCGAATAGATTCGTGAGGCAGACTTAAACAGCGTCATGCCC > 6:134587/1‑149 GAGTTTCCCGGTAATGGTGCTGGTGGAAGTGCTGGTATTGGTGCCTGTCACCCAGCTTATTTCCTTTCCATTGGCCGGGTGGCTGGTTGCCCGTTTAAGGCGAATAGATTCGTGAGGCAGACTTAAACAGCGTCATGCCCTCACGAATC > 8:74299/1‑149 AGTTTCCCGGTAATGGTGCTGGTGGAAGTGCTGGTATTGGTGCCTGTCACCCAGCTTATTTCCTTTCCATTGGCCGGTTGGCTGGTTGCCGGTTTAAGGCGAATAGATTCGTGAGGCAGACTTAAACAGCGTCATGCCCTCACGAA < 6:346872/146‑1 ATGGTGCTGGTGGAAGTGCTGGTATTGGTGCCTGTCACCCAGCTTATTTCCTTTCCATTGGCCGGGTGGCTGGTTGCCCGTTTAAGGCGAATAGATTCGTGAGGCAGACTTAAACAGCGTCATGCCCTCACGAATCTATTCGCCTTAAA < 7:74299/149‑1 ATTGGTGCCTGTCACCCAGCTTATTTCCTTTCCATTGGCCGGGTGGCTGGTTGCCCGTTTAAGGCGAATAGATTCGTGAGG > 3:304178/1‑81 ATTGGTGCCTGTCACCCAGCTTATTTCCTTTCCATTGGCCGGGTGGCTGGTTGCCCGTTTAAGGCGAATAGATTCGTGAGG < 4:304178/81‑1 TGAGGCAGACTTAAACAGCGTCATGCCCTCACGAATCTATTCGCCTTAAACGGGCAACCAGCCACCCGGCCAATGGAAAGGGAATAAGCTGGGTGACAGGCACCAATACCAGCACTTCCACCAGCACCATTACCGGGAAACTCAGATCA > 3:197801/1‑149 AGGCAGACTTAAACAGCGTCATGCCCTCACGAATCTATTCGCCTTAAACGGGCAACCAGCCACCCGGCCAATGGAAAGGAAATAAGCTGGGTGACAGGCACCAATACCAGCACTTCCACCAGCACCATTACCGGGAAACTCAGATCAC < 4:395964/148‑1 GGCAGACTTAAACAGCGTCATGCCCTCACGAATCTATTCGCCTTAAACGGGCAACCAGCCACCCGGCCAATGGAAAGGAAATAAGCTGGGTGACAGGCACCAATACCAGCACTTCCACCAGCACCATTACCGGGAAACTCAGATCACGG < 1:224073/149‑1 GCAGACTTAAACAGCGTCATGCCCTCACGAATCTATTCGCCTTAAACGGGCAACCAGCCACCCGGCCAATGGAAAGGAAATAAGCTGGGTGACAGGCACCAATACCAGCACTTCCACCAGCACCATTACCGGGAAACTCAGATCACGGG > 3:219835/1‑149 GCAGACTTAAACAGCGTCATGCCCTCACGAATCTATTCGCCTTAAACGGGCAACCAGCCACCCGGCCAATGGAAAGGAAATAAGCTGGGTGACAGGCACCAATACCAGCACTTCCACCAGCACCATTACCGGGAAACTCAGATCAC > 7:332062/1‑146 GCAGACTTAAACAGCGTCATGCCCTCACGAATCTATTCGCCTTAAACGGGCAACCAGCCACCCGGCCAATGGAAAGGAAATAAGCTGGGTGACAGGCACCAATACCAGCACTTCCACCAGCACCATTACCGGGAAACTCAGATCAC > 7:337799/1‑146 GCAGACTTAAACAGCGTCATGCCCTCACGAATCTATTCGCCTTAAACGGGCAACCAGCCACCCGGCCAATGGAAAGGAAATAAGCTGGGTGACAGGCACCAATACCAGCACTTCCACCAGCACCATTACCGGGAAACTCAGATCAC < 8:332062/146‑1 GCAGACTTAAACAGCGTCATGCCCTCACGAATCTATTCGCCTTAAACGGGCAACCAGCCACCCGGCCAATGGAAAGGAAATAAGCTGGGTGACAGGCACCAATACCAGCACTTCCACCAGCACCATTACCGGGAAACTCAGATCAC < 8:337799/146‑1 GTGCTGAGTGTATTAGCCCCGCTGACCCGTGATCTGAGTTTCCCGGTAATGGTGCTGGTGGAAGTGCTGGTATTGGTGCCTGTCACCCAGCTTATTTCCTTTCCATTGGCCGGGTGGCTGGTTGCCCGTTTAAGGCGAATAGATTCGTGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2823676‑2823827‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtgaggCAGACTTAAACAGCGTCATGCCCTCACGAATCTATTCGCCTTAAACGGGCAACCAGCCACCCGGCCAATGGAAAGGAAATAAGCTGGGTGACAGGCACCAATACCAGCACTTCCACCAGCACCATTACCGGGAAACTCAGATCACGGG < NC_002947/2823848‑2823701 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |