| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2939916 = | 58 (0.890) | 3 (0.050) | 3/254 | NT | 5.8% | coding (226/648 nt) | PP_2572 | hypothetical protein |
| ? | NC_002947 | 2939957 = | 41 (0.660) | coding (185/648 nt) | PP_2572 | hypothetical protein | |||||
GATGCGCCACGAATTCAGCGAAGTGCTCAACGACCTGGTCGACTACTTTCTGCTCGGCGATATCCAGTTGCTCGAGCGCTTCAAGCAAGACCATCAACTGCCCGACGACCTGGCCGGTGCGTTCACCCACGGTGACAGCGGCGACCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2940064‑2939916‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggTCGTCGGGCAGTTGATGGTCTTGCTTGAAGCGCTCGAGCAACTGGATATCGCCGAGCAGAAAGTAGTCGACCAGGTCGTTGAGCACTTCGCTGAATTCGTGGCGCATCTTTTTTCCTTGTGGGTGCGCATTGGGGTAAGGGCAAC > NC_002947/2939957‑2940101 GATGCGCCACGAATTCAGCGAAGTGCTCAACGACCTGGTCGACTACTTTCTGCTCGGCGATATCCAGTTGCTCGAGCGCTTCAAGCAAGACCATCACCTGCCCGACGACCTGGCCGCTGCCTTCACCCCCGGAGACACCGGCGACCAGG > 4:258607/1‑149GATGCGCCACGAATTCAGCGAAGTGCTCAACGACCTGGTCGACTACTTTCTGCTCGGCGATATCCAGTTGCTCGAGCGCTTCAAGCAAGACCATCAACTGCCCGACGACCTGGCCGGTGCGTTCACCCACGGTGACAGCGGCGACCAGG > 3:279011/1‑149 GACGACCTGGCCGGTGCGTTCACCCACGGTGACAGCGGCGACCAGGTCGTCGGGCAGTTGATGGTCTTGCTTGAAGCGCTCGAGCAACTGGATATCGCCGAGCAGAAAGTAGTCGACCAGGTCGTTGAGCACTTCGCTGAATTCGTGGC > 4:344845/1‑149 CCTGGCCGGTGGGTTCACCCACGGTGACAGCGGCGACCAGGTCGTCGGGCAGTTGATGGTCTTGCTTGAAGCGCTCGAGCAACTGGATATCGCCGAGCAGAAAGTAGTCGACCAGGTCGTTGAGCA < 8:155679/126‑1 CCTGGCCGGTGGGTTCACCCACGGTGACAGCGGCGACCAGGTCGTCGGCCAGTTGATGGTCTTGCTTGAAGCGCTCGAGCAACTGGATATCGCCGAGCAGAAAGTAGTCGACCAGGTCGTTGAGCA > 7:155679/1‑126 CAGGTCGTCGGGCAGTTGATGGTCTTGCTTGAAGCGCTCGAGCAACTGGATATCGCCGAGCAGAAAGTAGTCGACAAGGTCGTTGAGCACTTCGCTGAATTCGTGGCGCATCTTTTTTCCTTGTGGGTGCGCATTGGGGTAAGGGCAAC > 1:118777/1‑149 GATGCGCCACGAATTCAGCGAAGTGCTCAACGACCTGGTCGACTACTTTCTGCTCGGCGATATCCAGTTGCTCGAGCGCTTCAAGCAAGACCATCAACTGCCCGACGACCTGGCCGGTGCGTTCACCCACGGTGACAGCGGCGACCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2940064‑2939916‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggTCGTCGGGCAGTTGATGGTCTTGCTTGAAGCGCTCGAGCAACTGGATATCGCCGAGCAGAAAGTAGTCGACCAGGTCGTTGAGCACTTCGCTGAATTCGTGGCGCATCTTTTTTCCTTGTGGGTGCGCATTGGGGTAAGGGCAAC > NC_002947/2939957‑2940101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |