| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2973290 = | 50 (0.770) | 3 (0.050) | 3/250 | NT | 6.6% | coding (584/1713 nt) | PP_2600 | hypothetical protein |
| ? | NC_002947 | 2973324 = | 37 (0.600) | coding (550/1713 nt) | PP_2600 | hypothetical protein | |||||
CCGCGAGGTTGGCGCCCTGCTGCCACGCTTGCGCAAGACCATGCGCGAAACCTCGTTCATGGGCATGCCGATCATGGCCGGTGCCGACCTTGCCGCCTTCCTCAACATGACCCGCTCGCCCAAAGCCCTGCTGCACGTGTGCAAGCGCTTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2973442‑2973290‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctttggGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGAGGTTTCGCGCATGGTCTTGCGCAAGCGTGGCAGCAGGGCGCCAACCTCGCGGGCATCGTAGGGCGCGGCGATCACCTGGT > NC_002947/2973324‑2973470 CCGCGAGGTTGGCGCCCTGCTGCCACGCTTGCGCAAGACCATGCGCGAAACCTCGTTCATGGGCATGCCGATCATGGCCGGTGCCGACCTTGCCGCCTTCCTCAACATGACCCGCTCGCCCAAAGCCCTGCTGCACGTGTGCAAGCGCT > 8:311708/1‑149 CGCGAGGTTGGCGCCCTGCTGCCACGCTTGCGCAAGACCATGCGAGAAACCTCGTTCATGGGCATGCCGATCATGGCCGGTGCCGACCTTGCCGCCTTCCTCAACATGACCCGCTCGCCCAAAGCCCTGCTGCACGTGTGCAAGCGCTT > 4:309270/1‑149 GCAAGACCATGCGCGAAACCTCGTTCATGGGCATGCCGATCATGGCCGGTGCCGACCTTGCCGCCTTCCTCAACATGACCCGCTCGCCCAAAGCCCTGCTGCACGTGTGCAAGCGCT < 5:281671/117‑1 GCAAGACCATGCGCGAAACCTCGTTCATGGGCATGCCGATCATGGCCGGTGCCGACCTTGCCGCCTTCCTCAACATGACCCGCTCGCCCAAAGCCCTGCTGCACGTGTGCAAGCGCT > 6:281671/1‑117 CTCGCCCAAAGCCCTGCTGCACGTGTGCAAGCGCTTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGAGGTTTCGCGCATGGTCTTGCGCAAGCGTGGCAGCAGGGCGCC > 5:404688/1‑148 CCAAAGCCCTGCTGCACGTGTGCAAGCGCTTTGGGCGAGCGGGTCATGTTGAGG < 1:333458/54‑1 CCAAAGCCCTGCTGCACGTGTGCAAGCGCTTTGGGCGAGCGGGTCATGTTGAGG > 2:333458/1‑54 CTTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGAGGTTTCGCGCATGGTCTTGCGCAAGCGTGGCAGCAGGGCGCCAACCTCGCGGGCATCGTAGGGCGCGGCGATCACC > 2:318132/1‑149 TTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGAGGTTTCGCGCATGGTCTTGCGCAAGCGTGGCAGCAGGGCGCCAACCTCGCG < 3:356081/123‑1 TTTGGGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGAGGTTTCGCGCATGGTCTTGCGCAAGCGTGGCAGCAGGGCGCCAACCTCGCG > 4:356081/1‑123 GGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGAGGTTTCGCGCATGGTCTTGCGCAAGCGTGGCAGCAGGGCGCCAACCTCGCGGGCATCGTAGGGCGCGGCGATCACCTGGT < 6:404688/148‑1 CCGCGAGGTTGGCGCCCTGCTGCCACGCTTGCGCAAGACCATGCGCGAAACCTCGTTCATGGGCATGCCGATCATGGCCGGTGCCGACCTTGCCGCCTTCCTCAACATGACCCGCTCGCCCAAAGCCCTGCTGCACGTGTGCAAGCGCTTTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2973442‑2973290‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctttggGCGAGCGGGTCATGTTGAGGAAGGCGGCAAGGTCGGCACCGGCCATGATCGGCATGCCCATGAACGAGGTTTCGCGCATGGTCTTGCGCAAGCGTGGCAGCAGGGCGCCAACCTCGCGGGCATCGTAGGGCGCGGCGATCACCTGGT > NC_002947/2973324‑2973470 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |