New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3162747 =48 (0.740)3 (0.050) 3/254 NT 5.6% coding (115/570 nt) PP_2777 acyl carrier protein
?NC_002947 3162782 = 55 (0.880)coding (150/570 nt) PP_2777 acyl carrier protein

TCCTGCGTGATTCGGCCATTTTCGACAAACCGGGTGGCGTCGCCGAACACCGCTACCGCGTGATCCAGCACGCTGGTTTTCGGCAAGGTGCAACCGTACTGACGGCCCAGCTGGAAGCTCAGGTCGACGATGTCCAGCGAGTCGGCGCTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3162898‑3162747
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgagCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGTCGAAAATGGCCGAATCACGCAGGACGGCGTGGCCTTGCTGGAGCAGAGCCTC  >  NC_002947/3162782‑3162926
                                                                                                                                                                                                                                                                                                         
TCCTGCGTGATTCGGCCATTTTCGACAAACCGGGTGGCGTCGCCGAACACCGCTACCGCGTGATCCAGCACGCTGGTTTTCGGCAAGGTGCAACCGTACTGACGGCCCAGCTGGAAGCTCAGGTCGACGATGTCCAGCGAGTCGGCGCT                                                                                                                                                      <  1:249159/149‑1
  CTGCGTGATTCGGCCATTTTCGACAAACCGGGTGGCGTCGCCGAACACCGCTACCGCGTGATCCAGCACGCTGGTTTTCGGCAAGGTGCAACCGTACTGACGGCCCAGCTGGAAGCTCAGGTCGACGATGTCCAGCGAGTCGGCGCTGA                                                                                                                                                    <  3:399021/149‑1
  CTGCGTGATTCGGCCATTTTCGACAAACCGGGTGGCGTCGCCGAACACCGCTACCGCGTGATCCAGCACGCTGGTTTTCGGCAAGGTGCAACCGTACTGACGGCCCAGCTGGAAGCTCAGGTCGACGATGTCCAGCGAGTCGGCGCT                                                                                                                                                      >  7:294311/1‑147
     CGTGATTCGGCCATTTTCGACAAACCGGGTGGCGTCGCCGAACACCGCTACCGCGTGATCCAGCACGCTGGTTTTCGGCAAGGTGCAACCGTACTGACGGCCCAGCTGGAAGCTCAGGTCGACGATGTCCAGCGAGTCGGCGCTGAG                                                                                                                                                   <  3:399692/147‑1
                                                                                                                GGAAGCTCAGGTCGACGATGTCCAGCGAGTCGGCGCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGATTGTCGAAAATGGCCGAAT                                       >  1:371607/1‑148
                                                                                                                 GAAGCTCAGGTCGACGATGTCCAGCGAGTCGGCGCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGTCGAGAATGGCGGAgag                                      >  1:343432/1‑145
                                                                                                                 GAAGCTCAGGTCGACGATGTCCAGCGAGTCGGCGCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGTC                                                     <  2:343432/133‑1
                                                                                                                                                    TGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGTCGAAAATGGCCGAATCACGCAGGACGGCGTGGCCTTGCTGGAGCAGAGCCTC  <  2:371607/149‑1
                                                                                                                                                                                                                                                                                                         
TCCTGCGTGATTCGGCCATTTTCGACAAACCGGGTGGCGTCGCCGAACACCGCTACCGCGTGATCCAGCACGCTGGTTTTCGGCAAGGTGCAACCGTACTGACGGCCCAGCTGGAAGCTCAGGTCGACGATGTCCAGCGAGTCGGCGCTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3162898‑3162747
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgagCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGTCGAAAATGGCCGAATCACGCAGGACGGCGTGGCCTTGCTGGAGCAGAGCCTC  >  NC_002947/3162782‑3162926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.