New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3162747 =	48 (0.740)	3 (0.050)	3/254	NT	5.6%	coding (115/570 nt)	PP_2777	acyl carrier protein
	?	NC_002947	3162782 =	55 (0.880)					coding (150/570 nt)	PP_2777	acyl carrier protein

ATTCAATGCGGCTTTTGTAGGGAAACACTCAATGAATAATCCGTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGTCGAAAATGGCCGAATCACG  >  NC_002947/3162602‑3162893                                                                                                                                                  |                                                                                                                                                   gaggctctgctccagcaaggccacgccgtcctgcgtgattcggccattttcgacaaaccgggtggcgtcgccgaacaccgctaccgcgtgatccagcacgctggttttcggcaaggtgcaaccgtactgacggcccagctggaagCTCa                                                                                                                                                 <  2:371607‑M1/4‑1 (MQ=255) attcaATGCGGCTTTTGTAGGGAAACACTCAATGAATAATCCGTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATAATCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCt                                                                                                                                                   >  6:395352/1‑147 (MQ=255)               ttGTAGGGAAACACTCAATGAATAATCCGTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCt                                                                                                                                    <  5:190422/148‑1 (MQ=255)                               aaTGAATAATCCGTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCt                                                                                                                     >  4:145901/1‑147 (MQ=255)                               aaTGAATAATCCGTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCt                                                                                                                     <  4:185749/147‑1 (MQ=255)                               aaTGAATAATCCGTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCt                                                                                                                     >  1:91272/1‑147 (MQ=255)                               aaTGAATAATCCGTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCAAAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTTGACATCGTCGACCTGa                                                                                                                   >  8:294311/1‑149 (MQ=255)                                    ataatCCGTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTc                                                                                                              <  3:54840/149‑1 (MQ=255)                                     ctctccgccattctcgacaaaccgggtggcgtcgccgaacaccgctaccgcgtgatccagcacgctggttttcggcaaggtgcaaccgtactgacggcccagctggaagCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTc                                                                                                              >  1:343432‑M1/110‑148 (MQ=255)                                      attcggccattttcgacaatccgggtggcgtcgccgaacaccgctaccgcgtgatccagcacgctggttttcggcaaggtgcaaccgtactgacggcccagctggaagCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTcc                                                                                                             >  1:371607‑M1/109‑148 (MQ=255)                                           gTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTg                                                                                                                                   >  3:328046/1‑121 (MQ=255)                                           gTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTg                                                                                                                                   <  4:328046/121‑1 (MQ=255)                                           gTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTgg                                                                                                       >  5:146596/1‑149 (MQ=255)                                           gTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTgg                                                                                                       <  4:103428/149‑1 (MQ=255)                                           gTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTgg                                                                                                       >  3:331224/1‑149 (MQ=255)                                                aaTTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGATAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGt                                                                                                  >  4:98627/1‑149 (MQ=255)                                                 aTTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTc                                                                                                 <  2:91272/149‑1 (MQ=255)                                                    ggACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAg                                                                                               >  7:373572/1‑148 (MQ=255)                                                    gacaaaccgggtggcgtcgccgaacaccgctaccgcgtgatccagcacgctggttttcggcaaggtgcaaccgtactgacggcccagctggaagCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTc                                                                                                              <  2:343432‑M1/39‑1 (MQ=255)                                                            tcatcaGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTg                                                                                       >  6:25998/1‑148 (MQ=255)                                                            tcatcaGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGc                                                                                      <  5:25998/149‑1 (MQ=255)                                                             catcaGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGTCTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCa                                                                                     >  1:333850/1‑149 (MQ=255)                                                                 agcagTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCtt                                                                                 <  8:373572/149‑1 (MQ=255)                                                                     gTACACAGTATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCTGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTg                                                                                       <  7:357015/139‑1 (MQ=255)                                                                     gTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGGTg                                                                                       >  8:357015/1‑139 (MQ=255)                                                                        cacaGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCTGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGaa                                                                           >  1:128295/1‑148 (MQ=255)                                                                        cacaGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGaaa                                                                          <  1:312083/149‑1 (MQ=255)                                                                              atatTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGc                                                                    >  3:151890/1‑149 (MQ=255)                                                                                  tCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGc                                                                >  3:148028/1‑149 (MQ=255)                                                                                    ttGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTg                                                              >  3:238487/1‑149 (MQ=255)                                                                                      gcgcAGTTGCTGGTGCTGGGTAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACAtcgtcg                                                                                                                         <  6:42058/88‑1 (MQ=255)                                                                                      gcgcAGTTGCTGGTGCTGGGTAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACAtcgtcg                                                                                                                         >  5:42058/1‑88 (MQ=255)                                                                                              gctggtgctggATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCAcgcg                                                     <  4:331224/148‑1 (MQ=255)                                                                                               ctggtgctggATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCgg                                                    >  2:208939/1‑148 (MQ=255)                                                                                               ctggtgctggATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCgg                                                    <  4:238487/148‑1 (MQ=255)                                                                                                  gtgctggATAGGGGCGACGTGATAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGc                                                <  3:98627/149‑1 (MQ=255)                                                                                                     ctggATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGgt                                             <  2:128295/149‑1 (MQ=255)                                                                                                     ctggATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGgt                                             <  5:395352/149‑1 (MQ=255)                                                                                                          tAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCg                                        <  1:208939/149‑1 (MQ=255)                                                                                                           aGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACg                                                                                           >  2:283638/1‑97 (MQ=255)                                                                                                           aGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACg                                                                                           <  1:283638/97‑1 (MQ=255)                                                                                                             gggCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGGACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCggag                                     >  8:338408/1‑147 (MQ=255)                                                                                                                   cGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTggg                                                                                                      >  4:182149/1‑78 (MQ=255)                                                                                                                      gACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCAccc                            >  3:135571/1‑149 (MQ=255)                                                                                                                         agagCACAGCAGTCTTGCGGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGt                         <  4:44961/149‑1 (MQ=255)                                                                                                                         agagCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTg                                                              <  2:302352/112‑1 (MQ=255)                                                                                                                         agagCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTg                                                              >  1:302352/1‑112 (MQ=255)                                                                                                                              acaGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGTc                    >  5:274206/1‑149 (MQ=255)                                                                                                                                agcagTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGt                     <  2:307605/146‑1 (MQ=255)                                                                                                                                agcagTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGt                     >  1:307605/1‑146 (MQ=255)                                                                                                                                  cagTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGttt                       >  3:80346/1‑142 (MQ=255)                                                                                                                                  cagTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGttt                       <  4:80346/142‑1 (MQ=255)                                                                                                                                       ttgttgACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGTCGAAAATgg            <  4:148028/148‑1 (MQ=255)                                                                                                                                             acgacCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGTCGAAAATGGCCGAAt      >  6:173611/1‑148 (MQ=255)                                                                                                                                               gacCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGTCGAAAATGGCCGAATCAc   <  6:146596/149‑1 (MQ=255)                                                                                                                                                  CTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGTCGAAAATGGCCGAATCACg  <  3:399692‑M1/147‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   ATTCAATGCGGCTTTTGTAGGGAAACACTCAATGAATAATCCGTTGGAATTGGACAGCGTCATCAGCAGTACACAGGATATTCTTGCGCAGTTGCTGGTGCTGGATAGGGGCGACGTGACAGAGCACAGCAGTATTGTTGACGACCTCAGCGCCGACTCGCTGGACATCGTCGACCTGAGCTTCCAGCTGGGCCGTCAGTACGGTTGCACCTTGCCGAAAACCAGCGTGCTGGATCACGCGGTAGCGGTGTTCGGCGACGCCACCCGGTTTGTCGAAAATGGCCGAATCACG  >  NC_002947/3162602‑3162893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.