New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3204236 =	56 (0.860)	3 (0.050)	3/254	NT	5.9%	coding (987/1422 nt)	PP_2810	hypothetical protein
	?	NC_002947	3204339 =	42 (0.670)					coding (1090/1422 nt)	PP_2810	hypothetical protein

CATTGGCCTCGACCACCCAGACGCGATGCAGCTCATAGCGACGCGACTGCGGCGCGATCGAGTCGTTGCCGGCGAACGCTTCTACCTTGGCGGCGGTGTCGTAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3204342‑3204236 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccAATGTCCGCCAAGGCATGCGCCACCAGGCGCCCAAGCGCATGTTCTACATCGACGAGGACAGCTGGAACCCGCTGCTGGCCGTCGACTTCGACAAGCAAGGGCAGATCTGGAAGGTGCGTGAAGGGTTCTCGATTCCCGTTTAC  >  NC_002947/3204339‑3204482                                                                                                                                                                                                                                                             CATTGGCCTCGACCACCCAGACGCGATGCAGCTCATAGCGACGCGACTGCGGCGCGATCGAGTCGTTGCCGGCGAACGCTTCTACCTTGGCGGCGGTGTCGTAGGCCAATGTCCGCCAAGGCATGCGCCACCAGGCGCCCAAGCGCATG                                                                                                        >  7:182436/1‑149      GCCTCGACCACCCAGACGCGATGCAGCTCATAGCGACGCGACTGCGGCGCGATCGAGTCGTTGCCGGCGAACGCTTCTACCTTGGCGGCGGTGTCGTAGGCCAATGTCCGCCAAGGCATGCGCCACCAGGCGCCCAAGCGCATGTTCT                                                                                                    >  8:85350/1‑148                                           GCGACTGCGGCGCGATCGAGTCGTTGCCGGCGAACGCTTCTACCTTGGCGGCGGTGTCGTAGGCCAATGTCCGCCAAGGCATGCGCCACCAGGCGCCCAAGCGCATGTTCTACATCGACGAGGACAGCTGGAACCCGCTGCTGGCCGTC                                                              <  7:85350/149‑1                                                                                                       AGGCCAATGTCCGCCAAGGCATGCGCCACCAGGCGCCCAAGCGCATGTTCTACATCGACGAGGACAGCTGGAACCCGCTGCTGGCCGTTGACTTCGACAAGCAAGGGCAGATCTGGAAGGTGCGTGAAGGGTTCTCGATTCCCGTTTAC  <  3:276535/149‑1                                                                                                                                                                                                                                                             CATTGGCCTCGACCACCCAGACGCGATGCAGCTCATAGCGACGCGACTGCGGCGCGATCGAGTCGTTGCCGGCGAACGCTTCTACCTTGGCGGCGGTGTCGTAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3204342‑3204236 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggccAATGTCCGCCAAGGCATGCGCCACCAGGCGCCCAAGCGCATGTTCTACATCGACGAGGACAGCTGGAACCCGCTGCTGGCCGTCGACTTCGACAAGCAAGGGCAGATCTGGAAGGTGCGTGAAGGGTTCTCGATTCCCGTTTAC  >  NC_002947/3204339‑3204482

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.