New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3238303 =	59 (0.910)	3 (0.050)	3/252	NT	5.1%	coding (742/1218 nt)	PP_2836	2‑keto‑3‑deoxyxylonate dehydratase
	?	NC_002947	3238338 =	56 (0.900)					coding (777/1218 nt)	PP_2836	2‑keto‑3‑deoxyxylonate dehydratase

CGGAGAGGATAAAGCCGTCCTCGCCTTCCACCCGCAGGTCCACCTCGGCAGCACGCACATCGTCCAGGCCGAAGCTTTCGTCGAACAACCGCAGCAGCGGGCCCAGTGCAGTGGAAGCGTTGTTGTCCTTGGCCTTGGACAGCAGCAACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3238453‑3238303 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacgcTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGACGGCTTTATCCTCTCCGGGCGCAGTTCCATGCGCCAGATCAGCCG  >  NC_002947/3238338‑3238481                                                                                                                                                                                                                                                                                                         CGGAGAGGATAAAGCCGTCCTCGCCTTCCACCCGCAGGTCCACCTCGGCAGCACGCACATCGTCCAGGCCGAAGCTTTCGTCGAACAACCGCAGCAGCGGGCCCAGTGCAGTGGAAGCGTTGTTGTCCTTGGCCTTGGACAGCAGCAAC                                                                                                                                                    <  6:181902/149‑1                                                                                                                  GAAGCGTTGTTGTCCTTGGCCTTGGACAGCAGCAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGACGGCTTTATCCT                                   >  4:285655/1‑149                                                                                                                     GCGTTGTTGTCCTTGGCCTTGGACAGCAGCAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTTGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGACGGCTTTAT                                      <  1:246240/143‑1                                                                                                                     GCGTTGTTGTCCTTGGCCTTGGACAGCAGCAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTTGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGACGGCTTTAT                                      >  2:246240/1‑143                                                                                                                                                  cacCGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTAGACCTGCGGGTGGAAGGCGAGGACGGCTTTATCCTCTCCGGGCGCAGTTCCATGCGCCAGAT        <  4:221179/141‑1                                                                                                                                                  CAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTAGACCTGCGGGTGGAAGGCGAGGACGGCTTTATCCTCTCCGGGCGCAGTTCCATGCGCCAGATCAGag   >  3:221179/1‑147                                                                                                                                                   AACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGACGGCTTTATCCTCTCCGGGCGCAGTTCCATGCGCCAGATCAGCCG  >  2:304814/1‑149                                                                                                                                                                                                                                                                                                         CGGAGAGGATAAAGCCGTCCTCGCCTTCCACCCGCAGGTCCACCTCGGCAGCACGCACATCGTCCAGGCCGAAGCTTTCGTCGAACAACCGCAGCAGCGGGCCCAGTGCAGTGGAAGCGTTGTTGTCCTTGGCCTTGGACAGCAGCAACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3238453‑3238303 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacgcTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGACGGCTTTATCCTCTCCGGGCGCAGTTCCATGCGCCAGATCAGCCG  >  NC_002947/3238338‑3238481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.