New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3238303 =59 (0.910)3 (0.050) 3/252 NT 5.1% coding (742/1218 nt) PP_2836 2‑keto‑3‑deoxyxylonate dehydratase
?NC_002947 3238338 = 56 (0.900)coding (777/1218 nt) PP_2836 2‑keto‑3‑deoxyxylonate dehydratase

CCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGACGGCTTTATC  >  NC_002947/3238158‑3238446
                                                                                                                                                 |                                                                                                                                                
ccACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGt                                                                                                                                               >  4:12599/1‑149 (MQ=255)
ccACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGt                                                                                                                                               >  3:263415/1‑149 (MQ=255)
 cggctgatctggcgcatggaactgcgcccggagaggataaagccgtcctcgccttccacccgcaggtccacctcggcagcacgcacatcgtccaggccgaagctttcgtcgaacaaccgcagcagcgggcccagtgcagtggaaGCGtt                                                                                                                                              >  2:304814‑M1/145‑149 (MQ=255)
  ctctgatctggcgcatggaactgcgcccggagaggataaagccgtcctcgccttccacccgcaggtctacctcggcagcacgcacatcgtccaggccgaagctttcgtcgaacaaccgcagcagcgggcccagtgcagtggaaGCGTtg                                                                                                                                             >  3:221179‑M1/144‑149 (MQ=255)
  aCGGCGCCGTCATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTtg                                                                                                                                             <  5:418362/149‑1 (MQ=255)
   cGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTtgc                                                                                                                                            <  3:299220/149‑1 (MQ=255)
   cGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTtgc                                                                                                                                            <  5:199863/149‑1 (MQ=255)
       gcCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTgctgct                                                                                                                                        <  8:144106/149‑1 (MQ=255)
       atctggcgcatggaactgcgcccggagaggataaagccgtcctcgccttccacccgcaggtctacctcggcagcacgcacatcgtccaggccgaagctttcgtcgaacaaccgcagcagcgggcccagtgcagtggaagcggtg                                                                                                                                             <  4:221179‑M1/6‑4 (MQ=255)
         acacttCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGt                                                                                                                                      <  5:152850/144‑1 (MQ=255)
           aCATCGGCATCCACCCCAAGTCCAGCTGGAACTACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTcc                                                                                                                                    <  3:45074/149‑1 (MQ=255)
              tCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGATGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTccaag                                                                                                                                 <  2:353663/149‑1 (MQ=255)
                  cATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGTGCAATGGCAGCTTCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGTGCGTAGTGCGTTGCTGCTGTcgaag                                                                                                                                 <  6:89698/145‑1 (MQ=255)
                     ccACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTccaaggccaag                                                                                                                           <  7:332063/148‑1 (MQ=255)
                     ccACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCAGCGCGACTTCGAACGACGTAGTGCGTTGCTGCTGAccaaggccaag                                                                                                                           >  8:332063/1‑148 (MQ=255)
                      cACCCCATGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTccaaggccaagg                                                                                                                          <  8:182971/148‑1 (MQ=255)
                         cccAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGacaa                                                                                                                      >  1:277563/1‑149 (MQ=255)
                                 cAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCt                                                                                                               <  7:179415/148‑1 (MQ=255)
                                  aggataaagccgtcctcgccttccacccgcaggtccacctcggcagcacgcacatcgtccaggccgaagctttcgtcgaacaaccgcagcagcgggcccagtgcagtggaaGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTc                                                                                                             >  4:285655‑M1/112‑149 (MQ=255)
                                     tGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCcac                                                                                                          >  3:218401/1‑149 (MQ=255)
                                     ataaagccgtcctcgccttccacccgcaggtccacctcggcagcacgcacatcgtccaggccgaagctttcgtcaaacaaccgcagcagcgggcccagtgcagtggaaGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGc                                                                                                                <  1:246240‑M1/35‑1 (MQ=255)
                                     ataaagccgtcctcgccttccacccgcaggtccacctcggcagcacgcacatcgtccaggccgaagctttcgtcaaacaaccgcagcagcgggcccagtgcagtggaaGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGc                                                                                                                >  2:246240‑M1/109‑143 (MQ=255)
                                           aacCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCcactacact                                                                                                    >  6:85803/1‑149 (MQ=255)
                                               cAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTACACTGGGc                                                                                                <  5:85803/149‑1 (MQ=255)
                                                    ccGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCgct                                                                                           >  6:302368/1‑149 (MQ=255)
                                                    ccGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCgct                                                                                           >  8:357266/1‑149 (MQ=255)
                                                      ggAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCGTGCTCGGCAACGACGTCAACCTGAGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCAAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCgctgc                                                                                         >  4:241270/1‑149 (MQ=255)
                                                          gtggtgCTGGCCGTGTCGAGCAATGGAAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGGTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCg                                                                                     <  3:12599/149‑1 (MQ=255)
                                                            ggtgCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGgt                                                                                   >  8:371725/1‑149 (MQ=255)
                                                                    ccGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTcgac                                                                           >  6:329092/1‑149 (MQ=255)
                                                                     cGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTcgac                                                                           >  1:340774/1‑148 (MQ=255)
                                                                         tCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGaaa                                                                      <  2:277563/148‑1 (MQ=255)
                                                                         tCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGaaa                                                                      <  5:329092/148‑1 (MQ=255)
                                                                         tCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAg                                                                     >  1:255517/1‑149 (MQ=255)
                                                                           gAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCcactg                                                                                                        <  1:131735/113‑1 (MQ=255)
                                                                           gAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCcactg                                                                                                        >  2:131735/1‑113 (MQ=255)
                                                                           gAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCt                                                                   >  6:181728/1‑149 (MQ=255)
                                                                             gCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTc                                                                 >  2:43146/1‑149 (MQ=255)
                                                                               aaTGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCcac                                                                                                          >  6:299266/1‑107 (MQ=255)
                                                                               aaTGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCcac                                                                                                          <  5:299266/107‑1 (MQ=255)
                                                                                   gcagcaTCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTg                                                           >  2:68118/1‑149 (MQ=255)
                                                                                    cagcaTCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGa                                                         >  3:47442/1‑149 (MQ=255)
                                                                                    cagcaTCAAGCGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTACGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTg                                                           >  4:365361/1‑148 (MQ=255)
                                                                                       caTCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGAc                                                        >  7:233923/1‑148 (MQ=255)
                                                                                           aaGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGAtgt                                                   <  5:302368/149‑1 (MQ=255)
                                                                                            aGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGTTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGAtgtg                                                  >  3:12838/1‑149 (MQ=255)
                                                                                            aGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGAtgtg                                                  <  6:20239/149‑1 (MQ=255)
                                                                                             gggCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATgtgc                                                 >  1:26922/1‑149 (MQ=255)
                                                                                              ggCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATgtgcgt                                               <  4:47442/149‑1 (MQ=255)
                                                                                              ctgccattGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATgtgc                                                 <  6:144372/141‑1 (MQ=255)
                                                                                                     tGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAAGCTTCGGCCTGGACGATGTGCGtgctgc                                          <  1:43146/149‑1 (MQ=255)
                                                                                                      gCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGcc                                         >  6:156346/1‑148 (MQ=255)
                                                                                                       cTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCg                                        <  7:371725/148‑1 (MQ=255)
                                                                                                        tCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAg                                      >  6:243733/1‑149 (MQ=255)
                                                                                                          ggCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAgg                                     <  7:239030/148‑1 (MQ=255)
                                                                                                          ggCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAg                                      <  4:263415/147‑1 (MQ=255)
                                                                                                          ggCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGt                                    <  5:181728/149‑1 (MQ=255)
                                                                                                                gacgTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCt                              >  7:360289/1‑149 (MQ=255)
                                                                                                                gacgTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCt                              <  4:218401/149‑1 (MQ=255)
                                                                                                                    tCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCgg                          <  2:255517/149‑1 (MQ=255)
                                                                                                                            cgcgACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGaa                    <  2:340774/147‑1 (MQ=255)
                                                                                                                               gACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGa               <  5:243733/149‑1 (MQ=255)
                                                                                                                                    cGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGa            <  3:365361/147‑1 (MQ=255)
                                                                                                                                     gAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGACgg         <  6:344709/149‑1 (MQ=255)
                                                                                                                                       aGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGACGGCt       <  7:357266/149‑1 (MQ=255)
                                                                                                                                          gCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTgg                      <  7:206071/131‑1 (MQ=255)
                                                                                                                                          gCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTgg                      >  8:206071/1‑131 (MQ=255)
                                                                                                                                            gTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGACGGCTTTATc  <  1:68118/149‑1 (MQ=255)
                                                                                                                                            gTAGTGCGGTGCTGTTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGACGGCTTTATc  <  4:12838/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
CCACGGCGCCGACATCGGCATCCACCCCAAGTCCAGCTGGAACAACCCAGAGCCGGAAGTGGTGCTGGCCGTGTCGAGCAATGGCAGCATCAAGGGCGCCATGCTCGGCAACGACGTCAACCTGCGCGACTTCGAAGGGCGTAGTGCGTTGCTGCTGTCCAAGGCCAAGGACAACAACGCTTCCACTGCACTGGGCCCGCTGCTGCGGTTGTTCGACGAAAGCTTCGGCCTGGACGATGTGCGTGCTGCCGAGGTGGACCTGCGGGTGGAAGGCGAGGACGGCTTTATC  >  NC_002947/3238158‑3238446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.