New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3253299 =	33 (0.510)	3 (0.050)	3/248	NT	7.4%	coding (143/729 nt)	PP_2851	hypothetical protein
	?	NC_002947	3253355 =	44 (0.720)					coding (87/729 nt)	PP_2851	hypothetical protein

AGGAGACAGCACCATGAGCACACGCGAAAGCAGGCACCCGGTGGTTTCCCGCAGCCAGTGGCTGGCGGCTCGCCAGCAACTGTGGCTGCACGAAAAAGCGTTTACCCACCACCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGCCTTGGGTAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3253454‑3253299 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggtaaaCGCTTTTTCGTGCAGCCACAGTTGCTGGCGAGCCGCCAGCCACTGGCTGCGGGAAACCACCGGGTGCCTGCTTTCGCGTGTGCTCATGGTGCTGTCTCCTCGCTGGGGGATTCACACCTTGGTCGAGTACGACCAGGTCGATTCGAC  >  NC_002947/3253355‑3253501                                                                                                                                                                                                                                                                                                                 AGGAGACAGCACCATGAGCACACGCGAAAGCAGGCACCCGGTGGTTTCCCGCAGCCAGTGGCTGGCGGCTCGCCAGCAACTGTGGCTGCACGAAAAAGCGTTTACCCACCACCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGCCTT                                                                                                                                                            <  3:199738/149‑1   GAGACAGCACCATGAGCACACGCGAAAGCAGGCACCCGGTGGTTTCCCGCAGCCATTGGCTGGCGGCTCGCCAGCAACTGTGGCTGCACGAAAAAGCTTTTACCCACCACCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGCCTTGG                                                                                                                                                          <  4:256576/149‑1   GAGACAGCACCATGAGCACACGCGAAAGCAGGCACCCGGTGGTTTCCCGCAGCCAGTGGCTGGCGGCTCGCCAGCAACTGTGGCTGCACGAAAAAGCGTTTACCCACCACCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGCCTTGG                                                                                                                                                          <  5:151041/149‑1    AGACAGCACCATGAGCACACGCGAAAGCAGGCACCCGGTGGTTTCCCGCAGCCAGTGGCTGGCGGCTCGCCAGCAACTGTGGCTGCACGAAAAAGCGTTTACCCACCACCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGCCTTGGG                                                                                                                                                         >  4:134426/1‑149    AGACAGCACCATGAGCACACGCGAAAGCAGGCACCCGGTGGTTTCCCGCAGCCAGTGGCTGGCGGCTCGCCAGCAACTGTGGCTGCACGAAAAAGCGTTTACCCACCACCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGCCTTGGG                                                                                                                                                         <  7:141495/149‑1        AGCACCATGAGCACACGCGAAAGCAGGCACCCGGTGGTTTCCCGCAGCCAGTGGCTGGCGGCTCGCCAGCAACTGTGGCTGCACGAAAAAGCGTTTACCCACCCCCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGGCTTGGGga                                                                                                                                                       >  2:314736/1‑145                                            GTTTCCCGCAGCCAGTGGCTGGCGGCTCGCCAGCAACTGTGGCTGCACGAAAAAGCGTTTACCCACCACCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGCCTTGG                                                                                                                                                          <  3:186139/108‑1                                            GTTTCCCGCAGCCAGTGGCTGGCGGCTCGCCAGCAACTGTGGCTGCACGAAAAAGCGTTTACCCACCACCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGCCTTGG                                                                                                                                                          >  4:186139/1‑108                                                                                          ACGAAAAAGCGTTTACCCACCACCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGCCTTGGGTAAACGCTTTTTCGTGCAGCCACAGTTGCTGGCGAGCCGCCAGCCACTGGCTGCGGGAAACCACCGGGTGCCTGCTTTCGCGTGTG                                                                   >  2:176312/1‑149                                                                                                   CGTTTACCCACCACCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGCCTTGGGTAAACGCTTTTTCGTGCAGCCACAGTTGCTGGCGAGCCGCCAGCCACTGGCTGCGGGAAACCACCGGGTGCCTGCTTTC                                                                          <  7:184892/133‑1                                                                                                   CGTTTACCCACCACCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGCCTTGGGTAAACGCTTTTTCGTGCAGCCACAGTTGCTGGCGAGCCGCCAGCCACTGGCTGCGGGAAACCACCGGGTGCCTGCTTTC                                                                          >  8:184892/1‑133                                                                                                                                                        GTAAACGCTTTTTCGTGCAGCCACAGTTGCTGGCGAGCCGCCAGCCACTGGCTGCGGGAAACCACCGGGTGCCTGCTTTCGCGTGTGCTCATGGTGCTGTCTCCTCGCTGGGGGATTCACACCTTGGTCGAGTACGACCAGGTCGATTC     <  4:199738/149‑1                                                                                                                                                           AACGCTTTTTCGTGCAGCCACAGTTGCTGGCGAGCCGCCAGCCACTGGCTGCGGGAAACCACCGGGTGCCTGCTTTCGCGTGTGCTCATGGTGCTGTCTCCTCGCTGGGTGATTCACACCTTGGTCGAGTACGACCAGGTCGATTCGA   <  8:63536/148‑1                                                                                                                                                            ACGCTTTTTCGTGCAGCCACAGTTGCTGGCGAGCCGCCAGCCACTGGCTGCGGGAAACCACCGGGTGCCTGCTTTCGCGTGTGCTCATGGTGCTGTCTACTCGCTGGGGGATTCACACCTTGGTCGAGTACGACCAGGTCGATTCGAC  >  5:170616/1‑148                                                                                                                                                            ACGCTTTTTAGTGCAGCCACAGTTGCTGGCGAGCCGCCAGCCACTGGCTGCGGGAAACCACCGGGTGCCTGCTTTCGCGTGTGCTCATGGTGCTGTCTCCTAGCTGGGGGATTCACACCTAGGTCGAGTAAGACCAGGTCGAGTCGcc  >  6:23308/1‑146                                                                                                                                                                                                                                                                                                                 AGGAGACAGCACCATGAGCACACGCGAAAGCAGGCACCCGGTGGTTTCCCGCAGCCAGTGGCTGGCGGCTCGCCAGCAACTGTGGCTGCACGAAAAAGCGTTTACCCACCACCGCGACGCGCTAACTGCAGCCCGTCGCGCCCTGCCTTGGGTAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3253454‑3253299 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgggtaaaCGCTTTTTCGTGCAGCCACAGTTGCTGGCGAGCCGCCAGCCACTGGCTGCGGGAAACCACCGGGTGCCTGCTTTCGCGTGTGCTCATGGTGCTGTCTCCTCGCTGGGGGATTCACACCTTGGTCGAGTACGACCAGGTCGATTCGAC  >  NC_002947/3253355‑3253501

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.