New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 356827257 (0.880)3 (0.050) 3/250 NT 5.3% coding (829/1998 nt) PP_3150 hypothetical protein
?NC_002947 = 3568302 54 (0.880)coding (859/1998 nt) PP_3150 hypothetical protein

CTGGCCTTGACTGAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3568119‑3568272
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaccaCTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGATCGCGCAATCGCCAGCCGTTGCTGGTGAGGTCACGGTTGAGCAGCTCGTCAGCCAGTTGGCCGAAGGTCAGCGCGGTATAGGCGGCAGCGTCCTTGACCCGCGC  <  NC_002947/3568302‑3568155
                                                                                                                                                                                                                                                                                                              
CTGGCCTTCAGTCAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCG                                                                                                                                                           >  8:40961/1‑149
  GGCCTTGACTGAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCA                                                                                                                                                         >  1:63044/1‑149
     CTTGACTGAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACC                                                                                                                                                       >  2:346292/1‑148
     CTTGACTGAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACC                                                                                                                                                       >  3:261885/1‑148
     CTTGACTGAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACC                                                                                                                                                       >  4:49938/1‑148
       tcagtcAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACC                                                                                                                                                       >  6:311044/7‑146
                                             AAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACCACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTA                                                                                                              >  3:267908/1‑149
                                              AGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACCACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTAC                                                                                                             <  4:328102/149‑1
                                                   GCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACCACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGATC                                                                                                        <  4:267908/149‑1
                                                                                                                                                   CGCACCACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGATCGCGCAATCGCCAGCCGTTGCTGGTGAGGTCACGGTTGAGCAGCTCGTCAGCCAGTTGGCCGAAGGTCAGCGCGGTATAGGCGGCAGCGTCCTTGAC        <  1:64844/149‑1
                                                                                                                                                   CGCACCACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGATCGCGCAATCGCCAGCCGTTGCTGGTGAGGTCACGGTTGAGCAGCTCGTCAGCCAGTTGGCCGAAGGTCAGCGCGGTATAGGCGGCAGCGTCCTTGAC        <  4:45708/149‑1
                                                                                                                                                       CCACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGATCGCGCAATCGCCAGCCGTTGCTGGTGAGGTCACGGTTGAGCAGCTCGTCAGCCAGTTGGCCGAAGGTCAGCGCGGTATAGGCGGCAGCGTCCTTGACCCGC    <  2:132204/149‑1
                                                                                                                                                         ACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGATCGCGCAATCGCCAGCCGTTGCTGGTGAGGTCACGGTTGAGCAGCTCGTCAGCCAGTTGGCCGAAGGTCAGCGCGGTATAGGCGGCAGCGTCCTTGACCCGCGC  <  6:86458/149‑1
                                                                                                                                                                                                                                                                                                              
CTGGCCTTGACTGAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3568119‑3568272
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaccaCTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGATCGCGCAATCGCCAGCCGTTGCTGGTGAGGTCACGGTTGAGCAGCTCGTCAGCCAGTTGGCCGAAGGTCAGCGCGGTATAGGCGGCAGCGTCCTTGACCCGCGC  <  NC_002947/3568302‑3568155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.