| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3596506 | 44 (0.680) | 3 (0.050) | 3/254 | NT | 6.0% | coding (500/1098 nt) | nemA | FMN‑linked N‑ethylmaleimide reductase |
| ? | NC_002947 | = 3596535 | 51 (0.810) | coding (471/1098 nt) | nemA | FMN‑linked N‑ethylmaleimide reductase | |||||
CACCGCCTCCAGCACAATGCGCGCACGGTTTTCAACGCTGCCGCCGTAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3596358‑3596506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatCGTCGCCGACTTTGGCCAGGCCGCGATCAATGCCTGTGAAGCCGGCTTCGACTTCATCGAGTTGCACGCCGCCCACGGTTACCTGCTGCACCAGTTCCTCACCCCCAGTGCCAACCAGCGCGAAGACCGCTACGGCGGCAGCGTTGAA < NC_002947/3596535‑3596388 CACCGCCTCCAGCACAATGCGCGCACGGTTTTCAACGCTGCCGCCGTAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCAT < 2:5435/149‑1CACCGCCTCCAGCACAATGCGCGCACGGTTTTCAACGCTGCCGCCGTAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCAT < 4:103334/149‑1 tGCTGCCGCCGTAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGTAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATCGTCGCCGACTTTGGCCAGGCCGCGATCAATGCCT < 6:350017/148‑1 gttctCGCCGTAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTCAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCTTCGTCGCCGACTTTGGCCAGGCCGCGATCAATGCCTG < 3:142033/144‑1 GCCGTAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCAGGCTTCACAGGCATCGTCGCCGACTTTGGCCAGGCCGCGATCAATGCCTG > 4:142033/1‑143 GCATCGTCGCCGACTTTGGCCAGGCCGCGATCAATGCCTGTGAAGCCGGCTTCGACTTCATCGAGTTGCACGCCGCCCACGGTTACCTGCTGCACCAGTTCCTCACCCCCAGTGCCAACCAGCGCGAAGACCGCTACGGCGGCAGCGTT > 2:239830/1‑149 TCGTCGCCGACTTTGGCCAGGCCGCGATCAATGCCTGTGAAGCCGGCTTCGACTTCATCGAGTTGCACGCCGCCCACGGTTACCTGCTGCACCAGTTCCTCACCCCCAGTGCCAACCAGCGCGAAGACCGCTACGGCGGCAGCGTTGAA < 3:395832/149‑1 TCGTCGCCGACTTTGGCCAGGCCGCGATCAATGCCTGTGAAGCCGGCTTCGACTTCATCGAGTTGCACGCCGCCCACGGTTACCTGCTGCACCAGTTCCTCACCCCCAGTGCCAACCAGCGCGAAGACCGCTACGGCGGCAGCGTTGAA < 7:375264/149‑1 CACCGCCTCCAGCACAATGCGCGCACGGTTTTCAACGCTGCCGCCGTAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3596358‑3596506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatCGTCGCCGACTTTGGCCAGGCCGCGATCAATGCCTGTGAAGCCGGCTTCGACTTCATCGAGTTGCACGCCGCCCACGGTTACCTGCTGCACCAGTTCCTCACCCCCAGTGCCAACCAGCGCGAAGACCGCTACGGCGGCAGCGTTGAA < NC_002947/3596535‑3596388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |