New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3596506 | 44 (0.680) | 3 (0.050) | 3/254 | NT | 6.0% | coding (500/1098 nt) | nemA | FMN‑linked N‑ethylmaleimide reductase |
? | NC_002947 | = 3596535 | 51 (0.810) | coding (471/1098 nt) | nemA | FMN‑linked N‑ethylmaleimide reductase |
TTCAACGCTGCCGCCGTAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAGGGGCCACGGGTGCCTTGCCGCCAGGTT > NC_002947/3596388‑3596674 | ttCAACGCTGCCGCCGTAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGa < 7:375264‑M2/149‑2 (MQ=255) ttCAACGCTGCCGCCGTAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGa < 3:395832‑M2/149‑2 (MQ=255) aaCGCTGCCGCCGTAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGatgc > 2:239830‑M2/1‑145 (MQ=255) tAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGc > 3:367327/1‑149 (MQ=255) cGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGATGATGCCAGCGATCTCCGCTTc < 5:107520/149‑1 (MQ=255) ggTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCg < 3:91724/149‑1 (MQ=255) cgcgCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGa < 6:320253/147‑1 (MQ=255) ttGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCgggg < 3:176815/149‑1 (MQ=255) ttGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCggg < 8:375264/148‑1 (MQ=255) tGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCggggg < 6:277355/149‑1 (MQ=255) cACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCgggggg > 6:203447/1‑147 (MQ=255) cACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCgggggg < 5:203447/147‑1 (MQ=255) cTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGa < 4:395832/149‑1 (MQ=255) ggggTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAg < 7:169488/147‑1 (MQ=255) ggTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGttt < 4:367327/149‑1 (MQ=255) ggAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCAcg > 7:327057/1‑149 (MQ=255) gAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCAcgc < 2:213972/149‑1 (MQ=255) aCTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCgt > 5:67934/1‑149 (MQ=255) gTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAgc > 6:374698/1‑118 (MQ=255) gTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAgc < 5:374698/118‑1 (MQ=255) agcagGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGtt < 4:293823/149‑1 (MQ=255) gTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCtt > 6:181303/1‑149 (MQ=255) aaCCGTGGGCGGAGTGCAACTCGATGAAGACGAAGACGGCTTCACAGGCATAGAACGCGGCCTGGCCAAACTCGGCGACGAAGCCAGCGATCTCCGCATCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACCCGTGTCAGGTTGCCttcc > 4:13847/1‑147 (MQ=255) gcgTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAg > 7:1518/1‑149 (MQ=255) gCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAggg < 1:206922/147‑1 (MQ=255) gCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAggg > 2:206922/1‑147 (MQ=255) aaCTCGATGAAGTCGAAAACGGCTTCACAGGCATTGATCTCGGACTGGACAAAGTCGGCGACGATGCCAGCGATCTCCGATTCGCAGAGCGACAGGGGGGCGGAGGTTTCAACGACAGTCAGGTTGCCTTTCGCGTCCCGCAGggaggt > 4:121005/1‑149 (MQ=255) cTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGgtgc > 3:199066/1‑149 (MQ=255) tCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGgtgcg > 3:326044/1‑149 (MQ=255) gATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGgtgcgtg > 4:12689/1‑149 (MQ=255) gATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGgtgcgt < 8:327057/148‑1 (MQ=255) aTGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGgtgcgtgc < 4:326044/149‑1 (MQ=255) gAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCg < 3:12689/149‑1 (MQ=255) aaGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCTGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCgg < 3:401012/149‑1 (MQ=255) aaGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAgg < 5:43942/108‑1 (MQ=255) aaGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAgg > 6:43942/1‑108 (MQ=255) gCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCa < 6:272348/149‑1 (MQ=255) ccGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGAGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAg > 2:321203/1‑149 (MQ=255) ggCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGACAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTg > 7:328923/1‑149 (MQ=255) acaGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGaa < 8:1518/148‑1 (MQ=255) acaGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAg > 3:317848/1‑149 (MQ=255) caGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGatgcctgtgaagcctgcttcgacttcatcgagttgcacgccgcccacggttacctgctgcaccagttcctcacccccagtgccaaccagcgcgaagaccgctacggc > 4:142033‑M2/1‑36 (MQ=255) caGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGaagcctgtgaagccggcttcgacttcatcgagttgcacgccgcccacggttacctgctgcaccagttcctgacccccagtgccaaccagcgcgaagaccgctacggcgagaac < 3:142033‑M2/149‑114 (MQ=255) caGGCATTGATCGCGGCCTGGCCAAAGTCGGAGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAgg < 1:321203/149‑1 (MQ=255) aGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGatgcctgtgaagccggcttcgacttcatcgagttgcacgccgcccacggttacctgctgcaccagttactcacccccagtgccaaccagcgcgaagaccgctacggcggcagca < 6:350017‑M2/149‑115 (MQ=255) aGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAggg > 6:108933/1‑149 (MQ=255) gCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAGGGGc > 6:135840/1‑149 (MQ=255) gCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAGGGGc > 7:46356/1‑149 (MQ=255) gCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAGGGGc > 8:116277/1‑149 (MQ=255) tGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAGGGGCCACg > 6:207159/1‑149 (MQ=255) aTCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGTCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCTTGCATCTGCCGGCAGTGCCGAAGGGGCCACgg < 3:13847/148‑1 (MQ=255) aTCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAGGGGCCACgg < 5:108933/148‑1 (MQ=255) gcgGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGggtggt < 6:226629/110‑1 (MQ=255) gcgGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGggtggt > 5:226629/1‑110 (MQ=255) gCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGTGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAGGGGCCACGGGTGCCTTgcc < 5:181303/147‑1 (MQ=255) cAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAGGGGCCACGGGTGCCTTgccgc > 1:27124/1‑147 (MQ=255) gTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAGGGGCCACGGGTGCCTTGCCGCCAGGtt < 8:46356/149‑1 (MQ=255) | TTCAACGCTGCCGCCGTAGCGGTCTTCGCGCTGGTTGGCACTGGGGGTGAGGAACTGGTGCAGCAGGTAACCGTGGGCGGCGTGCAACTCGATGAAGTCGAAGCCGGCTTCACAGGCATTGATCGCGGCCTGGCCAAAGTCGGCGACGATGCCAGCGATCTCCGCTTCGCTGAGCGCCCGGGGGGCGGAGGTTTCCACGCGTGTCAGGTTGCCTTGCGCGTCACGCAGGGTGGTGCGTGCATCTGCCGGCAGTGCCGAAGGGGCCACGGGTGCCTTGCCGCCAGGTT > NC_002947/3596388‑3596674 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |