New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3895667	60 (0.920)	4 (0.060)	4/250	NT	6.6%	coding (318/582 nt)	PP_3438	membrane protein
	?	NC_002947	= 3895689	57 (0.930)					coding (340/582 nt)	PP_3438	membrane protein

GCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3895547‑3895667 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcagccACTGCATCGCTGCGCCGTGCCAGGCTGAAGGGGCTTGGCTAGGCTGTGCGTTGTTCAGGTTACCGTCGTCACTGGCCAGCTTCCACGCCATGTACAGCAGAAACGCTACACCGCCCCAGTGCAACATCAGGCCCAGCAAGGGCCAGC  <  NC_002947/3895689‑3895543                                                                                                                                                                                                                                                                              GCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCACTGCATCGCTGCGCCGTGCCAGGCTG                                                                                                                          >  4:354552/1‑148    CTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCACTGCATCGCTGCGCCGTGCCAGGCTGAAGG                                                                                                                      <  6:399456/149‑1       GCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCACTGCATCGCTGCGCCGTGCCAGGCTGAAGGGG                                                                                                                    <  3:354552/148‑1       GCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCCACTGCATCGCTGCGCCGTGCCAGGCTGAAGGG                                                                                                                     <  3:225399/147‑1                                                                                                                     CAGCCACTGCATCGCTGCGCCGTGCCAGGCTGAAGGGGCTTGGCTAGGCTGTGCGTTGTTCAGGTTACCGTCGTCACTGGCCAGCTTCCACGCCATGTACAGCAGAAACGCTACACCGCCCCAGTGCAACATCAGGCCCAGCAAGGGC      <  1:213982/148‑1                                                                                                                     CAGCCACTGCATCGCTGCGCCGTGCCAGGCTGAAGGGGCTTGGCTAGGCTGTGCGTTGTTCAGGTTACCGTCGTCACTGGCCAGCTTCCACGCCATGTACAGCAGAAACGCTACACCGCCCCAGTGCAACATCAGGCCCAGCAAGGGC      >  5:55054/1‑148                                                                                                                        CCACTGCATCGCTGCGCCGTGCCAGGCTGAAGGGGCTTGGCTAGGCTGTGCGTTGTTCAGGTTACCGTCGTCACTGGCCAGCTTCCACGCCATGTACAGCAGAAACGCTACACCGCCCCAGTGCAACATCAGGCCCAGCAAGGGCCAGC  <  3:88861/149‑1                                                                                                                        CCACTGCATCGCTGCGCCGTGCCAGGCTGAAGGGGCTTGGCTAGGCTGTGCGTTGTTCAGGTTACCGTCGTCACTGGCCAGCTTCCACGCCATGTACAGCAGAAACGCTACACCGCCCCAGTGCAA                         >  5:117304/1‑126                                                                                                                        CCACTGCATCGCTGCGCCGTGCCAGGCTGAAGGGGCTTGGCTAGGCTGTGCGTTGTTCAGGTTACCGTCGTCACTGGCCAGCTTCCACGCCATGTACAGCAGAAACGCTACACCGCCCCAGTGCAA                         <  6:117304/126‑1                                                                                                                                                                                                                                                                              GCCCTTGCTGGGCCTGATGTTGCACTGGGGCGGTGTAGCGTTTCTGCTGTACATGGCGTGGAAGCTGGCCAGTGACGACGGTAACCTGAACAACGCACAGCCTAGCCAAGCCCCTTCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3895547‑3895667 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcagccACTGCATCGCTGCGCCGTGCCAGGCTGAAGGGGCTTGGCTAGGCTGTGCGTTGTTCAGGTTACCGTCGTCACTGGCCAGCTTCCACGCCATGTACAGCAGAAACGCTACACCGCCCCAGTGCAACATCAGGCCCAGCAAGGGCCAGC  <  NC_002947/3895689‑3895543

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.