| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4037012 | 70 (1.080) | 4 (0.070) | 4/246 | NT | 5.4% | coding (2063/2145 nt) | PP_3557 | methyl‑accepting chemotaxis transducer |
| ? | NC_002947 | = 4037047 | 74 (1.220) | coding (2098/2145 nt) | PP_3557 | methyl‑accepting chemotaxis transducer | |||||
TGACGGTGATCACCGACATGAACCTGCAGATCGCCTCTGCCGCCGAGGAGCAAAGCGCGGTAGCCGAGGAAATCAACAGCAACGTGGCGACCATTCGTGATGTCACTGAATCCCTGTCTGGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4036886‑4037012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccaggcTGTTCAGCGACTGGCTGACCCGCGCCGACTCGTTGGCCTGGCCAGACAGGGATTCAGTGACATCACGAATGGTCGCCACGTTGCTGTTGATTTCCTCGGCTACCGCGCTTTGCTCCTCGGCGGCAGAGGCGATCTGCAGGTTCATGT < NC_002947/4037047‑4036901 TGACGGTGATCACCGACATGAACCTGCAGATCGCCTCTGCCGCCGAGGAGCAAAGCGCGGTAGCCGAGGAAATCAACAGCAACGTGGCGACCATTCGTGATGTCACTGAATCCCTGTCTGGC < 5:121073/122‑1TGACGGTGATCACCGACATGAACCTGCAGATCGCCTCTGCCGCCGAGGAGCAAAGCGCGGTAGCCGAGGAAATCAACAGCAACGTGGCGACCATTCGTGATGTCACTGAATCCCTGTCTGGC > 6:121073/1‑122 TCACCGACATGAACCTGCAGATCGCCTCTGCCGCCGAGGAGCAAAGCGCGGTAGCCGAGGAAATCAACAGCAACGTGGCGACCATTCGTGATGTCACTGAATCCCTGTCTGGCCAGGCTGTTCAGCGACTGGCTGACCCGCGCCGACTC > 3:210801/1‑149 ACCTGCAGATCGCCTCTGCCGCCGAGGAGCAAAGCGCGGTAGCCGAGGAAATCAACAGCAACGTGGCGACCATTCGTGATGTCACTGAATCCCTGTCTGGCCAGGCTGTTCAGCGACTGGCTGACCCGCGCCGACTCGTTGGCCTGGCC < 8:2563/149‑1 ACCTGCAGATCGCCTCTGCCGCCGAGGAGCAAAGCGCGGTAGCCGAGGAAATCAACAGCAACGTGGCGACCATTCGTGATGTCACTGAATCCCTGTCTGGCCAGGCTGTTCAGCGACTGGCTGACCCGCGCCGACTCGTTGGCCTGGC < 4:401920/148‑1 aCTGCATATCGCATCTGCCGCCGAGGAGCAAAGCGAGGTAGCCGATGAAATCAACATAAACGTGGCTAACATTCGTGATGTCACTGAATCCCTGTCTGGCCATTCTGTTCAGCGACTTGCTGACCCTCGCCGACTCGTTGTCCTGGCCA < 4:210801/148‑1 GGCCAGGCTGTTCAGCGACTGGCTGACCCGCGCCGACTCGTTGGCCTGGCCAGACAGGGATTCAGTGACATCACGAATGGTCGCCACGTTGCTGTTGATTTCCTCGGCTACCGCGCTTTGCTCCTCGGCGGCAGAGGCGATCTGCAGGT > 6:109462/1‑149 GCTGTTCAGCGACTGGCTGACCCGCGCCGACTCGTTGGCCTGGCCAGACAGGGATTCAGTGACATCACGAATGGTCGCCACGTTGCTGTTGATTTCCTCGGCTACCGCGCTTTGCTCCTCGGCGGCAGAGGCGATCTGCAGGTTCATGT < 6:90559/149‑1 GCTGTTCAGCGACTGGCTGACCCGCGCCGACTCGTTGGCCTGGCCAGACAGGGATTCAGTGACATCACGAATGGTCGCCACGTTGCTGTTGATTTCCTCGGCTACCGCGCTTTGCTCCTCGGCGGCAGAGGCGATCTGCAG > 5:215974/1‑141 GCTGTTCAGCGACTGGCTGACCCGCGCCGACTCGTTGGCCTGGCCAGACAGGGATTCAGTGACATCACGAATGGTCGCCACGTTGCTGTTGATTTCCTCGGCTACCGCGCTTTGCTCCTCGGCGGCAGAGGCGATCTGCAG < 6:215974/141‑1 TGACGGTGATCACCGACATGAACCTGCAGATCGCCTCTGCCGCCGAGGAGCAAAGCGCGGTAGCCGAGGAAATCAACAGCAACGTGGCGACCATTCGTGATGTCACTGAATCCCTGTCTGGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4036886‑4037012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccaggcTGTTCAGCGACTGGCTGACCCGCGCCGACTCGTTGGCCTGGCCAGACAGGGATTCAGTGACATCACGAATGGTCGCCACGTTGCTGTTGATTTCCTCGGCTACCGCGCTTTGCTCCTCGGCGGCAGAGGCGATCTGCAGGTTCATGT < NC_002947/4037047‑4036901 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |