New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4511711	71 (1.090)	4 (0.070)	4/248	NT	5.5%	coding (78/1326 nt)	rarA	DNA‑dependent ATPase
	?	NC_002947	= 4511745	70 (1.150)					coding (44/1326 nt)	rarA	DNA‑dependent ATPase

ACCGTTTCGAAGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4511556‑4511711 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggccgCCCGTCTGCGCCCGTCCAGCCTGGATGAGTACGTCGGCCAGGAGCACCTGCTGGCGCGCGGTAAACCGCTGCGCGAAGCGCTGGAACAAGGTGCGCTGCACTCGATGATCTTCTGGGGGCCGCCCGGGGTCGGCAAGACCACGC  <  NC_002947/4511745‑4511602                                                                                                                                                                                                                                                                                                              ACCGTTTCGAAGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTC                                                                                                                                                         >  1:112960/1‑149 ACCGTTTCGAAGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTC                                                                                                                                                         >  3:49686/1‑149 ACCGTTTCGAAGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTC                                                                                                                                                         <  4:324618/149‑1       TCGAAGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGC                                                                                                                                                    <  2:33531/148‑1        CGAAGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCC                                                                                                                                                   <  2:112960/148‑1        CGAAGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCC                                                                                                                                                   <  8:158806/148‑1         GAAGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGG                                                                                                                                                     >  3:325269/1‑145         GAAGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGG                                                                                                                                                     <  4:325269/145‑1                   TCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGCCCGTCTGCGC                                                                                                                                       >  7:258775/1‑149                                                CGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGCCCGTCTGCGCCCGTCCAGCCTGGATGAGTACGTCGGCCA                                                                                                          <  8:258775/149‑1                                                                         CCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGCCCGTCTGCGCCCGTCCAGCCTGGATGAGTACGTCGGCCAGGA                                                                                                       >  1:38348/1‑127                                                                         CCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGCCCGTCTGCGCCCGTCCAGCCTGGATGAGTACGTCGGCCAGGA                                                                                                       <  2:38348/127‑1                                                                                                                                                     CCTGGCCGCCCGTCTGCGCCCGTCCAGCCTGGATGAGTACGTCGGCCAGGAGCACCTGCTGGCGCGCGGTAAACCGCTGCGCGAAGCGCTGGAACAAGGTGCGCTGCACTCGATGATCTTCTGGGGGCCGCCCGGGGTCGGCAAGACCA     <  7:165368/149‑1                                                                                                                                                        GGCCGCCCGTCTGCGCCCGTCCAGCCTGGATGAGTACGTCGGCCAGGAGCACCTGCTGGCGCGCGGTAAACCGCTGCGCGAAGCGCTGGAACAAGGTGCGCTGCACTCGATGATCTTCTGGGGGCCGCCCGGGGTCGGCAAGACCACGC  <  2:338965/149‑1                                                                                                                                                                                                                                                                                                              ACCGTTTCGAAGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4511556‑4511711 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggccgCCCGTCTGCGCCCGTCCAGCCTGGATGAGTACGTCGGCCAGGAGCACCTGCTGGCGCGCGGTAAACCGCTGCGCGAAGCGCTGGAACAAGGTGCGCTGCACTCGATGATCTTCTGGGGGCCGCCCGGGGTCGGCAAGACCACGC  <  NC_002947/4511745‑4511602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.