New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4511711	71 (1.090)	4 (0.070)	4/248	NT	5.5%	coding (78/1326 nt)	rarA	DNA‑dependent ATPase
	?	NC_002947	= 4511745	70 (1.150)					coding (44/1326 nt)	rarA	DNA‑dependent ATPase

AAGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGTCGAACTTGAACTTGCTGTCCGG  >  NC_002947/4511565‑4511857                                                                                                                                                   |                                                                                                                                                      aaGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGAGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCCGCGCTTCGAGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑c                                                                                                                                                    >  3:264380/1‑149 (MQ=255)      cgcATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCACGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TAc                                                                                                                                               <  1:289337/148‑1 (MQ=255)          tCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGcccgtctgcgc                                                                                                                                            >  7:258775‑M1/1‑138 (MQ=255)                        cAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGgc                                                                                                                            >  7:204640/1‑149 (MQ=255)                             aCCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGa                                                                                                                       >  6:169204/1‑149 (MQ=255)                               cgcgCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACg                                                                                                                     >  1:240674/1‑149 (MQ=255)                                gcgcCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTAGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑GACTCATCCAGGCTGGACGGGCGCAGACgg                                                                                                                    >  7:118367/1‑149 (MQ=255)                                    cAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACgg                                                                                                                    <  4:93696/145‑1 (MQ=255)                                    cAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACgg                                                                                                                    >  3:93696/1‑145 (MQ=255)                                      gCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGcggcc                                                                                                              <  2:338965‑M2/149‑6 (MQ=255)                                       cGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGcccgtctgcgcccgtccagcctggatgagtacgtcggcca                                                                                                               <  8:258775‑M1/149‑41 (MQ=255)                                         tGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGcggccagg                                                                                                           <  7:165368‑M2/149‑9 (MQ=255)                                            tCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCGGGTGGAGCG‑AACTCATCCAGGCTGGACGGGCGGAGACGGGCGGCCAgggg                                                                                                         >  1:339918/1‑149 (MQ=255)                                                gCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTg                                                                                                      <  1:132321/147‑1 (MQ=255)                                                ctgtaCCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTggg                                                                                                    <  2:12657/145‑1 (MQ=255)                                                 ccGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑c                                                                                                  >  2:316179/1‑149 (MQ=255)                                                  cGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CA‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑c                                                                                                  >  7:11419/1‑148 (MQ=255)                                                    aCCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGAc                                                                                               <  4:138491/149‑1 (MQ=255)                                                    aCCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGAc                                                                                               >  3:66237/1‑149 (MQ=255)                                                      cccGGGCGGTCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACgg                                                                                             >  6:159256/1‑149 (MQ=255)                                                      cccGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACgg                                                                                             <  2:240674/149‑1 (MQ=255)                                                       ccGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACggg                                                                                            >  5:114582/1‑149 (MQ=255)                                                       ccGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACggg                                                                                            <  3:204602/149‑1 (MQ=255)                                                         gggCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGtt                                                                                          <  6:198766/149‑1 (MQ=255)                                                          ggcggcCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTc                                                                                         <  4:49686/149‑1 (MQ=255)                                                           gcggcTCCCAGAAGATCATCGAGTGCAGCGCTGCTTGTTCCTGCGCTTCGCGCTGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑GG‑TACTCATCCAGGCTGGTCGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCg                                                                                        <  2:125469/149‑1 (MQ=255)                                                              gcCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCtt                                                                                     <  4:66237/149‑1 (MQ=255)                                                                ccccAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGcccgtctgcgcccgtccagcctggatgagtacgtcggccagga                                                                                                            <  2:38348‑M1/127‑44 (MQ=255)                                                                ccccAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGcccgtctgcgcccgtccagcctggatgagtacgtcggccagga                                                                                                            >  1:38348‑M1/1‑84 (MQ=255)                                                                    agaagaTCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGaaa                                                                                >  6:279036/1‑148 (MQ=255)                                                                    agaagaTCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGaaa                                                                                >  4:402229/1‑148 (MQ=255)                                                                        gaTCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGt                                                                           >  7:69861/1‑149 (MQ=255)                                                                           catcGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCa                                                                        >  3:12782/1‑149 (MQ=255)                                                                           catcGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCa                                                                        >  3:377975/1‑149 (MQ=255)                                                                           catcGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCa                                                                        >  2:210935/1‑149 (MQ=255)                                                                               gAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACggg                                                                                                                             >  5:42327/1‑93 (MQ=255)                                                                               gAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACggg                                                                                                                             <  6:42327/93‑1 (MQ=255)                                                                               gAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGc                                                                    >  2:126989/1‑149 (MQ=255)                                                                               gAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGc                                                                    >  7:19522/1‑149 (MQ=255)                                                                               gAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGc                                                                    <  1:126989/149‑1 (MQ=255)                                                                                aGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGc                                                                    >  2:58858/1‑148 (MQ=255)                                                                                 gTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGc                                                                    >  8:42514/1‑147 (MQ=255)                                                                                  tGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAg                                                                 <  5:169204/149‑1 (MQ=255)                                                                                    cAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGct                                                               >  8:370842/1‑149 (MQ=255)                                                                                      gcgcACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGctct                                                             <  8:143392/149‑1 (MQ=255)                                                                                      gcgcACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGctct                                                             <  8:204640/149‑1 (MQ=255)                                                                                       cgcACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTg                                                            <  1:316179/149‑1 (MQ=255)                                                                                       cgcACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTg                                                            <  1:58858/149‑1 (MQ=255)                                                                                          aCCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGt                                                          >  2:311093/1‑148 (MQ=255)                                                                                             ttGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACt                                                      >  4:354491/1‑149 (MQ=255)                                                                                               gTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTc                                                     <  5:35039/148‑1 (MQ=255)                                                                                                ttCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTcc                                                    <  3:354491/148‑1 (MQ=255)                                                                                                  ccAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCtt                                                  <  4:377975/148‑1 (MQ=255)                                                                                                   cAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGa                                                >  8:144357/1‑149 (MQ=255)                                                                                                   cAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CA‑TACTCATCCAGGCTGGACGGGCGCAGTCGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTg                                                 <  8:11419/148‑1 (MQ=255)                                                                                                    agggcTTCGCGCAGCGGTTTACCGCGCGCCAGCTGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCTCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGAt                                               <  4:264380/146‑1 (MQ=255)                                                                                                       gcTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCAc                                            >  4:82477/1‑149 (MQ=255)                                                                                                              gcAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGGCCTACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCcgc                                      <  1:320249/149‑1 (MQ=255)                                                                                                                  cGGTTTACCGCGCGCCAGCAGGTGCTGCTGGCCGA‑CGTTTCTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGccc                                  <  1:338965/149‑1 (MQ=255)                                                                                                                     tttACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTgg                              <  1:311093/149‑1 (MQ=255)                                                                                                                       tACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTggg                             <  7:144357/148‑1 (MQ=255)                                                                                                                         ccGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTg                                                            <  8:276033/115‑1 (MQ=255)                                                                                                                         ccGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTg                                                            >  7:276033/1‑115 (MQ=255)                                                                                                                         ccGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGAt                          <  2:339918/149‑1 (MQ=255)                                                                                                                          cgcgcgCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTg                                                                                                      >  5:353626/1‑73 (MQ=255)                                                                                                                          cgcgcgCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTg                                                                                                      <  6:353626/73‑1 (MQ=255)                                                                                                                           gcgcgcCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGt                        <  1:210935/149‑1 (MQ=255)                                                                                                                                 cagcagGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGACCTCTGGTTACTCCTTGAGCACGTCCGCGCCCTTGGGGATCTCgaacg                  >  5:10209/1‑148 (MQ=255)                                                                                                                                 cagcagGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGAGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGTCgaact                  >  1:282527/1‑149 (MQ=255)                                                                                                                                  agcagGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGTCgaactt                 >  1:108045/1‑149 (MQ=255)                                                                                                                                  agcagGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGTCgaactt                 >  4:112460/1‑149 (MQ=255)                                                                                                                                        tGCTCCTGGACGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGCCGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGTCgaacttgaactt           >  2:184207/1‑149 (MQ=255)                                                                                                                                          cTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGTCGaacttgaacttg          <  7:370842/148‑1 (MQ=255)                                                                                                                                          cTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGTCGaacttgaacttg          <  8:19522/148‑1 (MQ=255)                                                                                                                                           tCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGcggccaggagcacctgctggcgcgcggtaaaccgctgcgcgaagcgctggaacaaggtgcgctgcactcgatgatcttctgggg                               >  1:38348‑M2/1‑43 (MQ=255)                                                                                                                                           tCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGcggccaggagcacctgctggcgcgcggtaaaccgctgcgcgaagcgctggaacaaggtgcgctgcactcgatgatcttctgggg                               <  2:38348‑M2/127‑85 (MQ=255)                                                                                                                                           tCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCt                                                   >  6:87804/1‑106 (MQ=255)                                                                                                                                           tCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCt                                                   <  5:87804/106‑1 (MQ=255)                                                                                                                                            ccTGGCCGcccgtctgcgcccgtccagcctggatgagtacgtcggccaggagcacctgctggcgcgcggtaaaccgctgcgcgaagcgctggaacaaggtgcgctgcactcgatgatcttctgggggccgcccggggtcggcaagacca          <  7:165368‑M1/149‑142 (MQ=255)                                                                                                                                             cTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGTCGAACTTGAACTTGCt        <  3:402229/147‑1 (MQ=255)                                                                                                                                             cTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGAGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGTCGAACTTGAACTTGc         <  2:282527/146‑1 (MQ=255)                                                                                                                                              tGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGcggccaggagcacctgctggcgcgcggtaaaccgctgcgcgaagcgctggaacaaggtgcgctgcactcgatgatcttctgggggccgcccggggtcggcaagaccacg      <  8:258775‑M2/149‑110 (MQ=255)                                                                                                                                               ggCCGcccgtctgcgcccgtccagcctggatgagtacgtcggccaggagcacctgctggcgcgcggtaaaccgctgcgcgaagcgctggaacaaggtgcgctgcactcgatgatcttctgggggccgcccggggtcggcaagaccacgc       <  2:338965‑M1/149‑145 (MQ=255)                                                                                                                                                gCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGTCGAACTTGAACTTGCTGTcc    <  4:12782/148‑1 (MQ=255)                                                                                                                                                 ccGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGTCGAACTTGAACTTGCTGTCCgg  <  5:159256/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                      AAGTGCGCATCGCAGAACTGCGCCAGCAACCGCGCCAGCGTGGTCTTGCCGACCCCGGGCGGCCCCCAGAAGATCATCGAGTGCAGCGCACCTTGTTCCAGCGCTTCGCGCAGCGGTTTACCGCGCGCCAGCAGGTGCTCCTGGCCGA‑CG‑TACTCATCCAGGCTGGACGGGCGCAGACGGGCGGCCAGGGGCTGGG‑CGACGGGTTCGCTTCGAAACAGGTCCATGGCGAGCTCTGGTTACTCCTTGATCACGTCCGCGCCCTTGGGGATGTCGAACTTGAACTTGCTGTCCGG  >  NC_002947/4511565‑4511857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.