| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4600285 | 56 (0.860) | 4 (0.070) | 3/248 | NT | 6.9% | coding (987/1467 nt) | PP_4072 | hypothetical protein |
| ? | NC_002947 | = 4600338 | 55 (0.900) | coding (934/1467 nt) | PP_4072 | hypothetical protein | |||||
GCTCGGATTGCCCGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4600137‑4600285‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcccTTCTGGATTCGCGGCAGCTTTCTTGCCGCAACCGCCGCGTCGCGGCTGGCGATGGGCGAAGTGGCTGAGGCCATCCGTGCGGCGACCGCTCGTTTCGTGCTGCGCATGCCAGCGCTGCAGCAGCTGTGCTTCAGCGACGGTCGG < NC_002947/4600338‑4600195 GCTCGGATTGCCCGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCC < 1:408632/148‑1GCTCGGATTGCCCGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCC < 4:178313/148‑1GCTCGGATTGCCCGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGC < 1:401947/147‑1 CCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTT < 3:343999/126‑1 CCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTT > 4:343999/1‑126 CTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGC < 3:284880/126‑1 CTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGC > 4:284880/1‑126 GTCGACAAACACCCGACCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCAC > 1:232643/1‑96 GTCGACAAACACCCGACCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCAC < 2:232643/96‑1 ACAAACACCCGACCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCTTCTGGATTCGCGGCAGCTTTCTTGCCGCAACCGCCGCGTCGCGGCTGGC > 7:201262/1‑149 CCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCTTCTGGATTCGCGGCAGCTTTCTTGCCGCAACCGCCGCGTCGCGGCTGGCGATGGGCGAAGT < 5:146851/149‑1 CCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCTTCTGGATTCGCGGCAGCTTTCTTGCCGCAACCGCCGCGTCGCGGCTGGCGATGGGCGAAGT < 8:201262/149‑1 AAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCTTCTGGATTCGCGGCAGCTTTCTTGCCGCAACCGCCGCGTCGCGGCTGGCGATGGGCGAAGTGGCTGAG < 2:37792/147‑1 GCCCTTCTGGATTCGCGGCAGCTTTCTTGCCGCAACCGCCGCGTCGCGGCTGGCGATGGGCGAAGTGGCTGAGGCCATCCGTGCGGCGACCGCTCGTTTCGTGCTGCGCATGCCAGCGCTGCAGCAGCTGTGCTTCAGCGACGGTCGG < 3:179185/148‑1 CCCTTCTGGATTCGCGGCAGCTTTCTTGCCGCAACCGCCGCGTCGCGGCTGGCGATGGGCGAAGTGGCTGAGGCCATCCGTGCGGCGACCGCTCGTTTCGTGCTGCG < 3:91592/107‑1 CCCTTCTGGATTCGCGGCAGCTTTCTTGCCGCAACCGCCGCGTCGCGGCTGGCGATGGGCGAAGTGGCTGAGGCCATCCGTGCGGCGACCGCTCGTTTCGTGCTGCG > 4:91592/1‑107 GCTCGGATTGCCCGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACAGCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4600137‑4600285‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcccTTCTGGATTCGCGGCAGCTTTCTTGCCGCAACCGCCGCGTCGCGGCTGGCGATGGGCGAAGTGGCTGAGGCCATCCGTGCGGCGACCGCTCGTTTCGTGCTGCGCATGCCAGCGCTGCAGCAGCTGTGCTTCAGCGACGGTCGG < NC_002947/4600338‑4600195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |