New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 460028556 (0.860)4 (0.070) 3/248 NT 6.9% coding (987/1467 nt) PP_4072 hypothetical protein
?NC_002947 = 4600338 55 (0.900)coding (934/1467 nt) PP_4072 hypothetical protein

TCGGATTGCCCGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATAGTCGCTGGCAATATC  >  NC_002947/4600139‑4600431
                                                                                                                                                    |                                                                                                                                                  
tCGGATTGCCCGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCAt                                                                                                                                                  >  7:187046/1‑149 (MQ=255)
  ggATTGCCCGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATc                                                                                                                                                 <  2:66556/148‑1 (MQ=255)
   gATTGCCCGTCTGCCCCTTTTAGCCAGGCCAGGCATTGGTCGTCGACAAACACCGGACCTTCGCTGAAGCACACCGTTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATc                                                                                                                                                 <  1:329501/149‑1 (MQ=255)
    aTTGCCCGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGc                                                                                                                                               >  2:285060/1‑148 (MQ=255)
    aTTGCCCGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGc                                                                                                                                               >  1:383609/1‑148 (MQ=255)
       gCCCGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGc                                                                                                                                           >  6:189012/1‑149 (MQ=255)
         ccGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCTGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCcg                                                                                                                                         >  3:392123/1‑149 (MQ=255)
                ccccTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGAcgcg                                                                                                                                  >  3:14061/1‑149 (MQ=255)
                ccccTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGAcgcg                                                                                                                                  >  3:114234/1‑149 (MQ=255)
                 cccTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACgcgg                                                                                                                                 <  5:189012/149‑1 (MQ=255)
                          ccaggccaggCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCgg                                                                                                                        <  3:257455/149‑1 (MQ=255)
                                caggcATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGaa                                                                                                                  <  8:187046/149‑1 (MQ=255)
                                caggcATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGCCCTCAGCCACTTCGCCCATCGCCAGCCGCCACGCGGCGGTTGCGGAAAGa                                                                                                                   >  6:124498/1‑148 (MQ=255)
                                     aTTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTg                                                                                                             >  4:275709/1‑149 (MQ=255)
                                        ggTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGaaa                                                                                                                 >  8:152893/1‑142 (MQ=255)
                                        ggTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGaaa                                                                                                                 <  7:152893/142‑1 (MQ=255)
                                           cgtcgACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCcgcg                                                                                                        >  3:388337/1‑148 (MQ=255)
                                               gACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATcc                                                                                                   <  7:271031/149‑1 (MQ=255)
                                                aCAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCttctggattcgcggcagctttcttgccgcaaccgccgcgtcgcggctggc                                                                                                  >  7:201262‑M1/1‑99 (MQ=255)
                                                      acCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCt                                                                                                              >  3:295891/1‑131 (MQ=255)
                                                      acCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCt                                                                                                              <  4:295891/131‑1 (MQ=255)
                                                        ccGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAgggc                                                                                           <  3:179185‑M2/148‑5 (MQ=255)
                                                            ccGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCttctggattcgcggcagctttcttgccgcaaccgccgcgtcgcggctggcgatgggcgaagt                                                                                      <  5:146851‑M1/149‑63 (MQ=255)
                                                            ccGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCttctggattcgcggcagctttcttgccgcaaccgccgcgtcgcggctggcgatgggcgaagt                                                                                      <  8:201262‑M1/149‑63 (MQ=255)
                                                             cGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCTGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGcc                                                                                     <  4:392123/149‑1 (MQ=255)
                                                             cGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGc                                                                                                                       >  6:362639/1‑115 (MQ=255)
                                                             cGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGc                                                                                                                       <  5:362639/115‑1 (MQ=255)
                                                             cGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGcc                                                                                     >  8:327539/1‑149 (MQ=255)
                                                                  cTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGaca                                                                                 >  7:294108/1‑148 (MQ=255)
                                                                     aaGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCttctggattcgcggcagctttcttgccgcaaccgccgcgtcgcggctggcgatgggcgaagtggctgag                                                                               <  2:37792‑M1/147‑70 (MQ=255)
                                                                     aaGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGCCGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGCAGGGCGAAGCCGACACACt                                                                             >  6:414418/1‑149 (MQ=255)
                                                                              gctgctGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTc                                                                       >  2:64198/1‑148 (MQ=255)
                                                                               ctgctgCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGa                                                                     <  7:327539/149‑1 (MQ=255)
                                                                                  gtgctgcGCATGCAAGCGCTGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGAccc                                                                  >  4:400568/2‑149 (MQ=255)
                                                                                  ctgcAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGGCACACTTTTTTCGAccc                                                                  >  8:227707/1‑149 (MQ=255)
                                                                                   tgcAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCg                                                                 >  3:379618/1‑149 (MQ=255)
                                                                                     cAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGa                                                                                                                   <  3:314527/97‑1 (MQ=255)
                                                                                     cAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGa                                                                                                                   >  4:314527/1‑97 (MQ=255)
                                                                                     cAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCt                                                               <  1:285060/149‑1 (MQ=255)
                                                                                      aGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTg                                                              <  3:275709/149‑1 (MQ=255)
                                                                                          cTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGc                                                          <  8:294108/149‑1 (MQ=255)
                                                                                           tGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGc                                                          >  4:69041/1‑148 (MQ=255)
                                                                                             gCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAAc                                                       >  8:384418/1‑149 (MQ=255)
                                                                                              cATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACg                                                      >  4:208015/1‑149 (MQ=255)
                                                                                               aTGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGc                                                     >  2:218611/1‑149 (MQ=255)
                                                                                                  cgcAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAggg                                                                                            >  4:91592‑M2/1‑104 (MQ=255)
                                                                                                  cgcAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAggg                                                                                            <  3:91592‑M2/107‑4 (MQ=255)
                                                                                                   gcagcaCGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCg                                                 <  3:208015/149‑1 (MQ=255)
                                                                                                       caCGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGa                                             <  7:384418/149‑1 (MQ=255)
                                                                                                         cGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGAt                                            >  8:230175/1‑148 (MQ=255)
                                                                                                          gAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTa                                          <  4:14061/149‑1 (MQ=255)
                                                                                                            aaCGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGa                                                            <  7:187263/129‑1 (MQ=255)
                                                                                                            aaCGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGa                                                            >  8:187263/1‑129 (MQ=255)
                                                                                                               gAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTg                                     <  4:388337/149‑1 (MQ=255)
                                                                                                                   ggTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCgg                                 >  5:198121/1‑149 (MQ=255)
                                                                                                                       gccgcACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGAt                             >  5:250289/1‑149 (MQ=255)
                                                                                                                       gccgcACGGATGGCCTCAGCCACTTCGCCAATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGAt                             >  6:116078/1‑149 (MQ=255)
                                                                                                                        ccgcACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATg                            <  5:56892/149‑1 (MQ=255)
                                                                                                                          gcACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGc                          <  1:64198/149‑1 (MQ=255)
                                                                                                                                   gCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATa                 <  5:304724/149‑1 (MQ=255)
                                                                                                                                    ccTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATAg                >  6:28750/1‑149 (MQ=255)
                                                                                                                                     cTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAgggcgaagtggctgaggccatccgtgcggcgaccgctcgtttcgtgctgcgcatgccagcgctgcagcagctgtgctt                 <  2:37792‑M2/147‑79 (MQ=255)
                                                                                                                                      tCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATAGTc              >  4:140253/1‑149 (MQ=255)
                                                                                                                                        aGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATAGTCGc            <  2:275124/149‑1 (MQ=255)
                                                                                                                                          ccACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGAGATGGCCTCCTCATAGTCGCTg          >  4:385490/1‑149 (MQ=255)
                                                                                                                                           cACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTACCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATAGTCGCTgg         >  6:46658/1‑149 (MQ=255)
                                                                                                                                            aCTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAgggcgaagtggctgaggccatccgtgcggcgaccgctcgtttcgtgctgcgcatgccagcgctgcagcagctgtgcttcagcgacgg        <  5:146851‑M2/149‑88 (MQ=255)
                                                                                                                                            aCTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAgggcgaagtggctgaggccatccgtgcggcgaccgctcgtttcgtgctgcgcatgccagcgctgcagcagctgtgcttcagcgacgg        <  8:201262‑M2/149‑88 (MQ=255)
                                                                                                                                            aCTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCCTCGATTACAGTGCCGGCGATGGCCTCCTCATAGTCGCTgg         >  5:351677/1‑148 (MQ=255)
                                                                                                                                             cTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCTAATCCAGAAGGGCGAAGCCGACACTCTTTTTTCGAGCCGCTGGAGGAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATAGTCGCTGGCa       <  3:400568/149‑1 (MQ=255)
                                                                                                                                              ttCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATAGTCGCTGGCaa      >  6:140817/1‑149 (MQ=255)
                                                                                                                                                 gCCCttctggattcgcggcagctttcttgccgcaaccgccgcgtcgcggctggcgatgggcgaagtggctgaggccatccgtgcggcgaccgctcgtttcgtgctgcgcatgccagcgctgcagcagctgtgcttcagcgacggtcgg    <  3:179185‑M1/148‑145 (MQ=255)
                                                                                                                                                  cccttctggattcgcggcagctttcttgccgcaaccgccgcgtcgcggctggcgatgggcgaagtggctgaggccatccgtgcggcgaccgctcgtttcgtgctgcg                                            <  3:91592‑M1/107‑105 (MQ=255)
                                                                                                                                                  cccttctggattcgcggcagctttcttgccgcaaccgccgcgtcgcggctggcgatgggcgaagtggctgaggccatccgtgcggcgaccgctcgtttcgtgctgcg                                            >  4:91592‑M1/1‑3 (MQ=255)
                                                                                                                                                  cccATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATa                 <  3:112988/134‑1 (MQ=255)
                                                                                                                                                  cccATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATa                 >  4:112988/1‑134 (MQ=255)
                                                                                                                                                  cccATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATAGTCGCTGGCAATATc  <  6:250289/149‑1 (MQ=255)
                                                                                                                                                  cccATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGAGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATAGTCGCTGGCAATATc  >  1:84813/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
TCGGATTGCCCGTCTGCCCCTTTGAGCCAGGCCAGGCATTGGTCGTCGACAAACACCCGACCGTCGCTGAAGCACA‑‑GCTGCTGCAGCGCTGGCATGCGCAGCACGAAACGAGCGGTCGCCGCACGGATGGCCTCAGCCACTTCGCCCATCGCCAGCCGCGACGCGGCGGTTGCGGCAAGAAAGCTGCCGCGAATCCAGAAGGGCGAAGCCGACACACTTTTTTCGACCCGCTGGAGCAACGCTGCGTCGATTACAGTGCCGGCGATGGCCTCCTCATAGTCGCTGGCAATATC  >  NC_002947/4600139‑4600431

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.