| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4839026 = | 72 (1.110) | 4 (0.060) | 4/250 | NT | 6.1% | coding (790/942 nt) | ccoP‑I | cbb3‑type cytochrome c oxidase subunit |
| ? | NC_002947 | 4839072 = | 55 (0.890) | coding (836/942 nt) | ccoP‑I | cbb3‑type cytochrome c oxidase subunit | |||||
ACTCACTTGGCCGTCACAGCCTCAGCCGAACCATCCTGCGACAGGCTATACACGTAAGCCGCCAGCAGGTGCACCTTGTCATTCCCCTGGATCTCGGCCTGCGCCGGCATTTGCCCCTGGCGACCATAACGAATGGTCTGCTGCAGCTGGGCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4839180‑4839026‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaaaTGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGC > NC_002947/4839072‑4839215 ACTCACTTGGCCGTCACAGCCTCAGCCGAACCATCCTGCGACAGGCTATACACGTAAGCCGCCAGCAGGTGCACCTTGTCATTCCCCTGGATCTCGGCCTGCGCCGGCATTTGCCCCTGGCGACCATAACGAATGGTCTGCTGCAGCTG < 4:139962/149‑1 ACTTGGCCGTCACAGCCTCAGCCGAACCATCCTGCGACAGGCTATACACGTAAGCCTCCAGCAGGTGCACCTTGTCATTCCCCTGGATCTCGGCCTGCGCCGGCATTTGCCCCTGGCGACCATAACGAATGGTCTGCTGCAGCTGGGC > 1:315545/1‑148 ACTTGGCCGTCACAGCCTCAGCCGAACCATCCTGCGACAGGCTATACACGTAAGCCGCCAGCAGGTGCACCTTGTCATTCCCCTGGATCTCGGCCTGCGCCGGCATTTGCCCCTGGCGACCATAACGAATGGTCTGCTGCAGCTGGGC > 2:404406/1‑148 ACTTGGCCGTCACAGCCTCAGCCGAACCATCCTGCGACAGGCTATACACGTAAGCCGCCAGCAGGTGCACCTTGTCATTCCCCTGGATCTCGGCCTGCGCCGGCATTTGCCCCTGGCGACCATAACGAATGGTCTGCTGCAGCTGGGC > 3:229319/1‑148 CTTGGCCGTCACAGCCTCAGCCGAACCATCCTGCGACAGGCTATACACGTAAGCCGCCAGCAGGTGCACCTTGTCATTCCCCTGGATCTCGGCCTGCGCCGGCATTTGCCCCTGGCGACCATAACGAATGGTCTGCTGCAGCTGGGCA > 8:56035/1‑148 CGGCATTTGCCCCTGGCGACCATAACGAATGGTCTGCTGCAGCTGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACG > 7:225234/1‑149 TTTGCCCCTGGCGACCATAACGAATGGTCTGCTGCAGCTGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCC < 3:248716/147‑1 TTTGCCCCTGGCGACCATAACGAATGGTCTGCTGCAGCTGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCC > 4:248716/1‑147 GTCTGCTGCAGCTGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCC < 8:225234/148‑1 GCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGC < 8:110886/149‑1 ACTCACTTGGCCGTCACAGCCTCAGCCGAACCATCCTGCGACAGGCTATACACGTAAGCCGCCAGCAGGTGCACCTTGTCATTCCCCTGGATCTCGGCCTGCGCCGGCATTTGCCCCTGGCGACCATAACGAATGGTCTGCTGCAGCTGGGCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4839180‑4839026‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaaaTGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACGGCCAAGTGAGTTCGCCGAAAGGCATTTGCCGCCTGTGAGATCGAGC > NC_002947/4839072‑4839215 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |