New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4839026 =	72 (1.110)	4 (0.060)	4/250	NT	6.1%	coding (790/942 nt)	ccoP‑I	cbb3‑type cytochrome c oxidase subunit
	?	NC_002947	4839072 =	55 (0.890)					coding (836/942 nt)	ccoP‑I	cbb3‑type cytochrome c oxidase subunit

CTGAGGGCGCGAAGGCCGATGTGGAGAACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACG  >  NC_002947/4838880‑4839169                                                                                                                                                     |                                                                                                                                                cTGAGGGCGCGAAGGCCGATGTGGAGAACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCttt                                                                                                                                               >  6:152008/1‑149 (MQ=39)    aGGGCGCGAAGGCCGATGTGGAGAACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGcc                                                                                                                                            <  2:137261/149‑1 (MQ=39)    aGGGCGCGAAGGCCGATGTGGAGAACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGcc                                                                                                                                            <  6:137108/149‑1 (MQ=39)     gctcgatctcacaggcggcaaatgcctttcggcgaactcacttggccgtcacagcctcagccgaaccatcctgcgacaggctatacacgtaagccgccagcaggtgcaccttgtcattcccctggatctcggcctgcgccggcaTTTGc                                                                                                                                             <  8:110886‑M1/5‑1 (MQ=255)      ggCGCGAAGGCCGATGTGGAGAACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGcc                                                                                                                                            >  5:71205/1‑147 (MQ=39)      ggCGCGAAGGCCGATGTGGAGAACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGcc                                                                                                                                            >  3:177411/1‑147 (MQ=39)       gcgcGAAGGCCGATGTGGAGAACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAg                                                                                                                                         <  2:314578/149‑1 (MQ=38)             aGGCCGATGTGGAGAACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTgcag                                                                                                                                   <  7:42225/149‑1 (MQ=39)                 cGATGTGGAGAACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGa                                                                                                                               <  2:255908/149‑1 (MQ=39)                     ggcaaatgcctttcggcgaactcacttggccgtcacagcctcagccgaaccatcctgcgacaggctatacacgtaagccgccagcaggtgcaccttgtcattcccctggatctcggcctgcgccggcaTTTGCCCAGCTGCAGCAGAc                                                                                                                              <  8:225234‑M1/20‑1 (MQ=255)                       ggAGAACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTc                                                                                                                         >  4:188439/1‑149 (MQ=39)                        gagaACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCAtt                                                                                                                          <  3:239203/147‑1 (MQ=39)                        gagaACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCAtt                                                                                                                          >  4:239203/1‑147 (MQ=39)                        gagaACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCg                                                                                                                        >  5:47781/1‑149 (MQ=39)                           aaCGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTAGCCCAGCTGCAGCAGACCATTCGTTa                                                                                                                     >  7:175952/1‑149 (MQ=255)                              gggCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATgg                                                                                                                  >  7:83189/1‑149 (MQ=39)                                gCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTc                                                                                                                >  6:285221/1‑149 (MQ=40)                                 cAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCg                                                                                                               <  5:152008/149‑1 (MQ=255)                                 cAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCg                                                                                                               >  4:81780/1‑149 (MQ=255)                                   gaagaTCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGc                                                                                                              >  7:110886/1‑148 (MQ=255)                                    aagaTCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGc                                                                                                              >  5:15360/1‑147 (MQ=255)                                            cGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCaaa                                                                                                    >  7:57832/1‑149 (MQ=255)                                               aGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTTGGTGGGATTTGCCCAGCGGCAGCACACCATTGGTTATGGTCCCCAGGGGAAAAt                                                                                                   >  1:334419/1‑149 (MQ=14)                                                ggccgtcacagcctcagccgaaccatcctgcgacaggctatacacgtaagccgccagcaggtgcaccttgtcattcccctggatctcggcctgcgccggcaTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCaaa                                                                                                    >  4:248716‑M1/102‑147 (MQ=255)                                                ggccgtcacagcctcagccgaaccatcctgcgacaggctatacacgtaagccgccagcaggtgcaccttgtcattcccctggatctcggcctgcgccggcaTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCaaa                                                                                                    <  3:248716‑M1/46‑1 (MQ=255)                                                gCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCTCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGcc                                                                                                <  6:47781/149‑1 (MQ=255)                                                gCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGcc                                                                                                >  6:6528/1‑149 (MQ=255)                                                 ccAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCg                                                                                               <  7:116179/149‑1 (MQ=255)                                                 ccAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCg                                                                                               >  1:280681/1‑149 (MQ=255)                                                   cgtcacagcctcagccgaaccatcctgcgacaggctatacacgtaagccgccagcaggtgcaccttgtcattcccctggatctcggcctgcgccggcaTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCg                                                                                               >  7:225234‑M1/99‑149 (MQ=255)                                                   aaCTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGgc                                                                                             >  2:37330/1‑149 (MQ=255)                                                            gCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGcc                                                                                      >  7:53030/1‑147 (MQ=255)                                                                 ccACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTACGGTCGCCAGGGGCAAATGCCGGCGCAGGCCg                                                                                     <  8:339698/143‑1 (MQ=255)                                                                 ccACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTAAGGTCGCCAGGGGCAAATGCCGGCGCAGGCCg                                                                                     >  7:339698/1‑143 (MQ=255)                                                                    cGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAgg                                                                            <  6:15360/149‑1 (MQ=255)                                                                       gCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAgggg                                                                          >  2:195032/1‑148 (MQ=255)                                                                         cGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTTCGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAAt                                                                       <  2:200007/149‑1 (MQ=255)                                                                         cGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTAt                                                                                                                    <  7:343728/104‑1 (MQ=255)                                                                         cGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTAt                                                                                                                    >  8:343728/1‑104 (MQ=255)                                                                           gAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGa                                                                     >  4:225041/1‑149 (MQ=255)                                                                               gCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAg                                                                 <  1:195032/149‑1 (MQ=255)                                                                                cAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAgg                                                                <  4:177411/149‑1 (MQ=255)                                                                                 aaaGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGt                                                               >  7:67593/1‑149 (MQ=255)                                                                                  aaGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTg                                                              <  6:308249/149‑1 (MQ=255)                                                                                         gcccgccATGGGCGCTACGAACCTGACCCATCCGCAGGCGTTTATCTACTGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACctgc                                                       <  8:306362/149‑1 (MQ=255)                                                                                                 tGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCt                                               >  7:105454/1‑149 (MQ=255)                                                                                                   ggCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCtt                                              <  8:53030/148‑1 (MQ=255)                                                                                                   ggCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTa                                             >  1:168313/1‑149 (MQ=255)                                                                                                    gcgcTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTAc                                            <  8:57832/149‑1 (MQ=255)                                                                                                      gcTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACgt                                          <  8:67593/149‑1 (MQ=255)                                                                                                      gcTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACgt                                          <  3:188439/149‑1 (MQ=255)                                                                                                       cTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGGCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACgtg                                         <  5:6528/149‑1 (MQ=255)                                                                                                        tCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACgtg                                         >  3:137619/1‑148 (MQ=255)                                                                                                          cGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGta                                       >  1:163638/1‑148 (MQ=255)                                                                                                             aCCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGc                                   <  2:280681/149‑1 (MQ=255)                                                                                                                 gACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGACGGCGCAGGCCGAGATCCAGGGGAATGACAGGGTGCACCTGCTGGCGGCTTACGTCTATAGACTGt                               >  6:81113/1‑149 (MQ=255)                                                                                                                  aCCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTg                                <  8:105454/147‑1 (MQ=255)                                                                                                                  aCCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGt                               <  8:83189/148‑1 (MQ=255)                                                                                                                  aCCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTc                              <  2:334419/149‑1 (MQ=255)                                                                                                                    ccATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGc                            <  6:71205/149‑1 (MQ=255)                                                                                                                      aTCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCTGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAg                          >  1:286457/1‑149 (MQ=255)                                                                                                                      aTCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCg                                                                                     <  7:138799/90‑1 (MQ=255)                                                                                                                      aTCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCg                                                                                     >  8:138799/1‑90 (MQ=255)                                                                                                                                    aTCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAg                                                                             >  4:246518/1‑84 (MQ=255)                                                                                                                                    aTCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAg                                                                             <  3:246518/84‑1 (MQ=255)                                                                                                                                     tCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAg           >  7:10048/1‑149 (MQ=255)                                                                                                                                     tCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAg           >  2:315545/1‑149 (MQ=255)                                                                                                                                        aCGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCt        >  4:229319/1‑149 (MQ=255)                                                                                                                                        aCGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCt        >  1:308215/1‑149 (MQ=255)                                                                                                                                         cGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAgg          <  2:168313/146‑1 (MQ=255)                                                                                                                                         cGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCt        <  5:285221/148‑1 (MQ=255)                                                                                                                                           gTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCtgt      >  1:404406/1‑148 (MQ=255)                                                                                                                                            tt‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAATGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGAAGGTTCGGCTGAGGCTGTGa    >  5:272386/1‑149 (MQ=255)                                                                                                                                            tt‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGtat                                      <  1:203836/115‑1 (MQ=255)                                                                                                                                            tt‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGtat                                      >  2:203836/1‑115 (MQ=255)                                                                                                                                            tt‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCGTGTCGCAGGATGGTTCGGCTGAGGCTGTGa    <  1:37330/149‑1 (MQ=255)                                                                                                                                             t‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCtgtg     >  5:164919/1‑147 (MQ=255)                                                                                                                                             t‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCtgtg     <  6:164919/147‑1 (MQ=255)                                                                                                                                                 gAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACg  <  3:225041/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                CTGAGGGCGCGAAGGCCGATGTGGAGAACGGGCAGAAGATCTTCGCAGCCAACTGCGTGGCCTGCCACGGGCCGGAAGGCAAAGGTACGCCCGCCATGGGCGCTCCGAACCTGACCCATCCGCAGGCGTTTATCTACGGTT‑‑CGAGCTTTGCCCAGCTGCAGCAGACCATTCGTTATGGTCGCCAGGGGCAAATGCCGGCGCAGGCCGAGATCCAGGGGAATGACAAGGTGCACCTGCTGGCGGCTTACGTGTATAGCCTGTCGCAGGATGGTTCGGCTGAGGCTGTGACG  >  NC_002947/4838880‑4839169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.