| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5114635 | 50 (0.770) | 4 (0.060) | 4/250 | NT | 7.8% | coding (313/666 nt) | yciO | maturation protein |
| ? | NC_002947 | = 5114657 | 47 (0.760) | coding (291/666 nt) | yciO | maturation protein | |||||
GCTCATCAGTGGCTCGCCCAACTCGGCCAGCAAGGCCAGGGTGATGGCATGGTCCGGTACACGCAGCCCGATGGTACGCCGCTTATCGTGCAACAGCAGGCGCGGCACTTCACGCGTGCCGTTGAGGATGAAGGTGTAAGGCCCCGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5114486‑5114635‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcacCTTCCGCTTGCTGAAGGCGCATGTGCCGGGGCCTTACACCTTCATCCTCAACGGCACGCGTGAAGTGCCGCGCCTGCTGTTGCACGATAAGCGGCGTACCATCGGGCTGCGTGTACCGGACCATGCCATCACCCTGGCCTTGCT < NC_002947/5114657‑5114514 GCTCATCAGTGGCTCGCCCAACTCGGCCAGCAAGGCCAGGGTGATGGCATGGTCCGGTACACGCAGCCCGATGGTACGCCGCTTATCGTGCAACAGCAGGCGCGGCACTTCACGCGTGCCGTTGAGGATGAAGGTGTAAGGCCCC > 5:112492/1‑145GCTCATCAGTGGCTCGCCCAACTCGGCCAGCAAGGCCAGGGTGATGGCATGGTCCGGTACACGCAGCCCGATGGTACGCCGCTTATCGTGCAACAGCAGGCGCGGCACTTCACGCGTGCCGTTGAGGATGAAGGTGTAAGGCCCC < 6:112492/145‑1 CTCATCAGTGGCTCGCCCAACTCGGCCAGCAAGGCCAGGGTGATGGCATGGTCCGGTACACGCAGCCCGATGGTACGCCGCTTATCGTGCAACAGCAGGCGCGGCACTTCACGCGTGCCGTTGAGGATGAAGGTGTAAGGCCCCGGCAC < 5:267200/149‑1 GTGGCTCGCCCAACTCGGCCAGCAAGGCCAGGGTGATGGCATGGTCCGGTACACGCAGCCCGATGGTACGCCGCTTATCGTGCAACAGCAGGCGCGGCACTTCACGCGTGCCGTTGAGGATGAAGGTGTAAGGCCCCGGCACCTTCCGC > 4:190268/1‑149 AAGGCCAGGGTGATGGCATGGTCCGGTACACGCAGCCCGATTGTACGCCGCTTATCGTGCAACAGCAGGCGCGGCACTTCACGCGTGCCGTTGAGGATGAAGGTGTAAGGCCCCGGCACCTTCCGCTTGCTGAAGGCGCATGTGCCGGG < 3:190268/149‑1 ATGGTCCGGTACACGCAGCCCGATGGTACGCCGCTTATCGTGCAACAGCAGGCGCGGCACTTCACGCGTGCCGTTGAGGATGAAGGTGTAAGGCCCCGGCACCTTCCGCTTGCTGAAGGCGCATGTGCCGG < 5:270423/131‑1 ATGGTCCGGTACACGCAGCCCGATGGTACGCCGCTTATCGTGCAACAGCAGGCGCGGCACTTCACGCGTGCCGTTGAGGATGAAGGTGTAAGGCCCCGGCACCTTCCGCTTGCTGAAGGCGCATGTGCCGG > 6:270423/1‑131 CGGCACCTTCCGCTTGCTGAAGGCGCATGTGCCGGGGCCTTACACCTTCATCCTCAACGGCACGCGTGAAGTGCCGCGCCTGCTGTTGCACGATAAGCGGCGTACCATCGGGCTGCGTGTACCGGACCATGCCATCACCCTGGCCTTGC > 2:38061/1‑149 CGGCACCTTCCGCTTGCTGAAGGCGCATGTGCCGGGGCCTTACACCTTCATCCTCAACGGCACGCGTGAAGTGCCGCGCCTGCTGTTGCACGATAAGCGGCGTACCATCGGGCTGCGTGTACCGGACCATGCCATCACCCTGGCCTTGC < 3:285390/149‑1 CGGCACCTTCCGCTTGCTGAAGGCGCATGTGCCGGGGCCTTACACCTTCATCCTCAACGGCACGCGTGAAGTGCCGCGCCTGCTGTTGCACGATAAGCGGCGTACCATCGGGCTGCGTGTACCGGACCATGCCATCACCCTGGCCTTGC < 7:146225/149‑1 CGGCACCTTCCGCTTGCTGAAGGCGCATGTGCCGGGGCCTTACACCTTCATCCTCAACGGCACGCGTGAAGTGCCGCGCCTGCTGTTGCACGATAAGCGGCGTACCATCGGGCTGCGTGTACCGGACCAAGCCATCACCCTGGCCTTGC > 5:339864/1‑149 GGCACCTTCCGCTTGCTGAAGGCGCATGTGCCGGGGCCTTACACCTTCATCCTCAACGGCACGCGTGAAGTGCCGCGCCTGCTGTTGCACGATAAGCGGCGTACCATCGGGCTGCGTGTACCGGACCATGCCATCACCCTGGCCTTGCT < 1:38061/149‑1 GCTCATCAGTGGCTCGCCCAACTCGGCCAGCAAGGCCAGGGTGATGGCATGGTCCGGTACACGCAGCCCGATGGTACGCCGCTTATCGTGCAACAGCAGGCGCGGCACTTCACGCGTGCCGTTGAGGATGAAGGTGTAAGGCCCCGGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5114486‑5114635‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcacCTTCCGCTTGCTGAAGGCGCATGTGCCGGGGCCTTACACCTTCATCCTCAACGGCACGCGTGAAGTGCCGCGCCTGCTGTTGCACGATAAGCGGCGTACCATCGGGCTGCGTGTACCGGACCATGCCATCACCCTGGCCTTGCT < NC_002947/5114657‑5114514 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |