| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5152855 | 0 (0.000) | 3 (0.050) | 3/248 | NT | 100% | intergenic (‑932/+482) | PP_5696/PP_4537 | hypothetical protein/membrane protein |
| ? | NC_002947 | = 5152920 | NA (NA) | intergenic (‑997/+417) | PP_5696/PP_4537 | hypothetical protein/membrane protein | |||||
AAGACCCTCGTTTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5152701‑5152855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcctCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTTGATGCGCCGGCCACCG < NC_002947/5152920‑5152775 AAGACCCTCGTTTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACA < 8:192053/149‑1AAGACCCTCGTTTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACA < 6:288450/149‑1 GACCCTCGTTTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGC > 8:83013/1‑149 GACCCTCGTTTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGC < 8:226541/149‑1 CCTCGTTTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCC > 3:391939/1‑149 CCTCGTTTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCC > 5:401983/1‑149 TCGTTTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCT > 7:215502/1‑148 TGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCC > 7:218151/1‑120 TGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCC < 8:218151/120‑1 TTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACA < 2:98684/104‑1 TTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACA > 1:98684/1‑104 AGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTG > 3:223432/1‑149 GCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTTCGCTTCCTCACCCGCGAAGAAGATCAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGAGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACGTGGCTCAGGCGGTGTTCTTC < 4:106472/149‑1 TCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTC < 4:223432/149‑1 GCGCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGCCTGCGCTAGATGCGCCGGCCA > 2:197617/1‑149 GCCTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTTGATGCGCCGGCCACC < 7:9669/149‑1 CTCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTACGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTTGATGCGCCGGCCACCG > 7:8553/1‑148 AAGACCCTCGTTTCCATCCCCACCTGGCGCCTGATGAGCGAGTCATTCCGCAATTACCGCGGCATGCAGCAGTCCGGTGGCCGGCGCATCAAGCGCAGCCTGTTCATCGACGCCGCCGGCGTGCGCTTCCTCACCCGCGAAGAAGAACAGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5152701‑5152855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcctCGTTCCAGTTTTGCAGTTCCTGGCGCTTGCCCGCCAGGTAGTCACTCAGTAGCTGCACCTGGCTCAGGCGCTGTTCTTCTTCGCGGGTGAGGAAGCGCACGCCGGCGGCGTCGATGAACAGGCTGCGCTTGATGCGCCGGCCACCG < NC_002947/5152920‑5152775 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |