New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5258313 =	53 (0.810)	3 (0.050)	3/248	NT	5.2%	coding (844/1212 nt)	PP_4635	trans‑2‑enoyl‑CoA reductase
	?	NC_002947	5258382 =	59 (0.970)					coding (775/1212 nt)	PP_4635	trans‑2‑enoyl‑CoA reductase

ATATCACCTGGCCGATCTACTGGCACGGTGCACTGGGCCAGGCCAAGCAGGACCTGGACGAAACCGCCCTGCGTCTGAACCAGAAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCGGTGCTCAAGTCGGTGGTTACCCAGGCCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5258465‑5258313 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagctTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGGCGC  >  NC_002947/5258382‑5258522                                                                                                                                                                                                                                                                                                        ATATCACCTGGCCGATCTACTGGCACGGTGCACTGGGCCAGGCCAAGCAGGACCTGGACGAAACCGCCCTGCGTCTGAACCAGAAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCGGTGCTCAAGTCGGTGGTTACCCAGGCC                                                                                                                                                   <  5:300964/149‑1  TATCACCTGGCCGATCTACTGGCACGGTGCACTGGGCCAGGCCAAGCAGGACCTGGACGAAACCGCCCTGCGTCTGAACCAGAAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCGGTGCTCAAGTCGGTGGTTACCCAGGCC                                                                                                                                                   <  8:291861/148‑1     CACCTGGCGGATCTACTGGCACGGTGCACTGGGCCAGGCCAAGCAGGACCTGGACGAAACCGCCCTGCGTCTGAACCAGAAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCGGTGCTCAAGTCGGTGGTTACCCAGGCCAGCT                                                                                                                                               >  1:143559/1‑149                        CACGGTGCACTGGGCCAGGCCAAGCAGGACCTGGACGAAACCGCCCTGCGTCTGAACCAGAAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCGGTGCTCAAGTCGGTGGTTACCCAGGCCAGCT                                                                                                                                               <  3:297535/130‑1                        CACGGTGCACTGGGCCAGGCCAAGCAGGACCTGGACGAAACCGCCCTGCGTCTGAACCAGAAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCGGTGCTCAAGTCGGTGGTTACCCAGGCCAGCT                                                                                                                                               >  4:297535/1‑130                                                                                 CAGAAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCGGTGCTCAAGTCGGTGGTTACCCAGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGC                                                                     >  1:326861/1‑147                                                                                  AGAAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCGGTGCTCAAGTCGGTGGTTACCCAGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAG                                                                  >  2:152653/1‑149                                                                                    AAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCGGTGCTCAAGTCGGTGGTTACCCAGGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGT                                                                >  2:408378/1‑149                                                                                                                                                  GGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGGCGC  <  4:28394/149‑1                                                                                                                                                  GGCCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGGCGC  <  6:134933/149‑1                                                                                                                                                    CCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGGC    >  7:174657/1‑145                                                                                                                                                    CCAGCTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGGC    <  8:174657/145‑1                                                                                                                                                        CTTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGG‑CAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGT            >  6:56416/1‑132                                                                                                                                                                                                                                                                                                        ATATCACCTGGCCGATCTACTGGCACGGTGCACTGGGCCAGGCCAAGCAGGACCTGGACGAAACCGCCCTGCGTCTGAACCAGAAGCTGGCCGGTGAAGTGAAAGGCGGCGCCAATGTGGCGGTGCTCAAGTCGGTGGTTACCCAGGCCAGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5258465‑5258313 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagctTCTGGTTCAGACGCAGGGCGGTTTCGTCCAGGTCCTGCTTGGCCTGGCCCAGTGCACCGTGCCAGTAGATCGGCCAGGTGATATCGCTGCCGATATAGCTGAAGGCCACGGTGCGAGCGCCTTCGGCCAGTACATTGGCGC  >  NC_002947/5258382‑5258522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.