New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5430223 =	77 (1.180)	4 (0.060)	4/250	NT	5.3%	coding (96/480 nt)	PP_4769	hypothetical protein
	?	NC_002947	5430263 =	71 (1.150)					coding (56/480 nt)	PP_4769	hypothetical protein

CCGCGAAGGTCTGCGCAGCAGCCCCCCGGCACTCCAGGCCAAAAATGAGGTTCCCAGGTGAAAAAGATCGCGCTGTTCGCCGATGTGCAGAACCTCTACTACACCGTGCGCCAGGCCCACGGCTGCCATTTCAACTACACCGCCCTGTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5430375‑5430223 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgggccTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACA  >  NC_002947/5430263‑5430392                                                                                                                                                                                                                                                                                             CCGCGAAGGTCTGCGCAGCAGCCCCCCGGCACTCCAGGCCAAAAATGAGGTTCCCAGGTGAAAAAGATCGCGCTGTTCGCCGATGTGCAGAACCTCTACTACACCGTGCGCCAGGCCCACGGCTGCCATTTCCACTACACCGCCCTGTG                                                                                                                                        >  2:339994/1‑149   GCGAAGGTCTGCGCAGCAGCCCCCCGGCACTCCAGGCCAAAAATGAGGTTCCCAGGTGAAAAAGATCGCGCTGTTCGCCGATGTGCAGAACCTCTACTACACCGTGCGCCAGGCCCACGGCTGCCATTTCACCTACACCGCCCTGTGGG                                                                                                                                      >  5:1146/1‑149      AAGGTCTGCGCAGCAGCCCCCCGGCACTCCAGGCCAAAAATGAGGTTCCCAGGTGAAAAAGATCGCGCTGTTCGCCGATGTGCAGAACCTCTACTACACCGTGCGCCAGGCCCACGGCTGCCATTTCAACTACACCGCCCTGTGGGCC                                                                                                                                    >  6:109464/1‑148                                                                                                               CCAGGCCCACGGCTGCCATTTCAACTACACCGCCCTGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACC                          >  8:241972/1‑149                                                                                                                CAGGCCCACGGCTGCCATTTCAACTACACCGCCCTGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCT                         >  7:79751/1‑149                                                                                                                    CCCACGGCTGCCATTTCAACTACACCGCCCTGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGC                     <  8:79751/149‑1                                                                                                                                       CTACACCGCCCTGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACA  <  7:241972/149‑1                                                                                                                                                                                                                                                                                             CCGCGAAGGTCTGCGCAGCAGCCCCCCGGCACTCCAGGCCAAAAATGAGGTTCCCAGGTGAAAAAGATCGCGCTGTTCGCCGATGTGCAGAACCTCTACTACACCGTGCGCCAGGCCCACGGCTGCCATTTCAACTACACCGCCCTGTGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5430375‑5430223 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgggccTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACA  >  NC_002947/5430263‑5430392

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.