New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5430223 =	77 (1.180)	4 (0.060)	4/250	NT	5.3%	coding (96/480 nt)	PP_4769	hypothetical protein
	?	NC_002947	5430263 =	71 (1.150)					coding (56/480 nt)	PP_4769	hypothetical protein

CTCGAAACCGAGGTTGCGCAAGATCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACAGGTATCGCGC  >  NC_002947/5430115‑5430402                                                                                                                                                     |                                                                                                                                            cTCGAAACCGAGGTTGCGCAAGATCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGTGCGCTGTAGTTGAAATGGCATCCGTGGGACt                                                                                                                                             >  8:381485/1‑149 (MQ=255)  tCGAAACCGAGGTTGCGCAAGATCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTg                                                                                                                                            >  2:81396/1‑149 (MQ=255)  aggtctgcgcagcagccccccggcactccaggccaaaaatgaggttcccaggtgaaaaagatcgcgctgttcgccgatgtgcagaacctctactacaccgtgcgccaGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTg                                                                                                                                            >  7:79751‑M1/108‑149 (MQ=255)   ggtctgcgcagcagccccccggcactccaggccaaaaatgaggttcccaggtgaaaaagatcgcgctgttcgccgatgtgcagaacctctactacaccgtgcgccaGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTgg                                                                                                                                           >  8:241972‑M1/107‑149 (MQ=255)     aaaCCGAGGTTGCGCAAGATCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGgcg                                                                                                                                         <  6:364385/149‑1 (MQ=255)       aCCGAGGTTGCGCAAGATCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCa                                                                                                                                       >  4:73529/1‑149 (MQ=255)           aGGTTGCGCAAGATCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGgt                                                                                                                                   <  2:236953/149‑1 (MQ=255)             gTTGCGCAAGATCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGACTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGgtgt                                                                                                                                 <  6:361400/149‑1 (MQ=255)                gcgcAAGATCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTgtag                                                                                                                               <  5:325028/148‑1 (MQ=255)                  gcAGGATCTGCTAGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTgtag                                                                                                                               >  8:136319/1‑146 (MQ=255)                  gcAAGATCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGCCGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTgtag                                                                                                                               >  6:407802/1‑146 (MQ=255)                   cAAGATCTTCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGGCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTaga                                                                                                                           <  8:327776/149‑1 (MQ=255)                    aaGATCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTagag                                                                                                                          >  3:108927/1‑149 (MQ=255)                      gATCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGt                                                                                                                        >  6:271996/1‑149 (MQ=255)                        tCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTc                                                                                                                      >  4:272784/1‑149 (MQ=255)                           gctgGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTg                                                                                                                    >  3:57327/1‑148 (MQ=255)                            ctgGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGc                                                                                                                   <  5:236691/148‑1 (MQ=255)                              ggAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGcaca                                                                                                                >  5:129538/1‑149 (MQ=255)                               gAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGcaca                                                                                                                <  1:81396/148‑1 (MQ=255)                                     ctgTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGc                                                                                                           <  7:366265/147‑1 (MQ=255)                                     ctgTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCg                                                                                                          >  3:314221/1‑148 (MQ=255)                                     ctgTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCg                                                                                                          >  3:170455/1‑148 (MQ=255)                                     ctgTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCg                                                                                                          >  7:58431/1‑148 (MQ=255)                                           tttGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAgcg                                                                                                   >  3:199265/1‑149 (MQ=255)                                           tttGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAgc                                                                                                    <  4:314221/148‑1 (MQ=255)                                           tttGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAgc                                                                                                    <  4:227123/148‑1 (MQ=255)                                              gCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGa                                                                                                >  7:284590/1‑149 (MQ=255)                                              gCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGACCTTAGCGGCTGACATAGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATAGGCGAACAGCGGGa                                                                                                >  1:84077/1‑149 (MQ=255)                                                tGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATc                                                                                              >  2:276128/1‑149 (MQ=255)                                                 gTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCt                                                                                             >  7:30629/1‑149 (MQ=255)                                                 gTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCt                                                                                             >  1:372281/1‑149 (MQ=255)                                                  tCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCtt                                                                                            >  1:377256/1‑149 (MQ=255)                                                    gCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGaa                                                                                                        <  8:361416/135‑1 (MQ=255)                                                    gCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGaa                                                                                                        >  7:361416/1‑135 (MQ=255)                                                    gCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCtttt                                                                                          <  2:377256/149‑1 (MQ=255)                                                     ccACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCttttt                                                                                         <  6:65653/149‑1 (MQ=255)                                                     ccACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCttttt                                                                                         <  8:58431/149‑1 (MQ=255)                                                          atcgatGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCt                                                                                    <  5:197670/149‑1 (MQ=255)                                                             gatGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTggg                                                                                 <  8:30629/149‑1 (MQ=255)                                                             gatGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTggg                                                                                 <  2:372281/149‑1 (MQ=255)                                                                 gCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAAc                                                                              <  2:335555/148‑1 (MQ=255)                                                                  cATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCt                                                                            >  5:79456/1‑149 (MQ=255)                                                                   aTAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCt                                                                            >  6:1146/1‑148 (MQ=255)                                                                    tAGGGCTCGGCGTGGAGGTTCTGGCGTTGGGGGCTGACATCGGCCCACAGGGCTGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCa                                                                          <  7:381485/149‑1 (MQ=255)                                                                     aGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCAt                                                                         >  8:125144/1‑149 (MQ=255)                                                                       gCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAgcg                                                                                                   >  5:108192/1‑121 (MQ=255)                                                                       gCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAgcg                                                                                                   <  6:108192/121‑1 (MQ=255)                                                                          aCGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTg                                                                    <  4:327441/149‑1 (MQ=255)                                                                          aCGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTg                                                                    <  3:272784/149‑1 (MQ=255)                                                                              ccTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCt                                                                >  2:100609/1‑149 (MQ=255)                                                                               cTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGCACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTg                                                               >  8:265109/1‑149 (MQ=255)                                                                               cTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTg                                                               >  5:109464/1‑149 (MQ=255)                                                                               cTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTg                                                               <  1:276128/149‑1 (MQ=255)                                                                                tCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCttt                                                                                           <  1:181996/120‑1 (MQ=255)                                                                                tCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCttt                                                                                           >  2:181996/1‑120 (MQ=255)                                                                                  gacgaTCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTgg                                                              <  7:125144/147‑1 (MQ=255)                                                                                          ggCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCgggg                                                    >  7:373183/1‑149 (MQ=255)                                                                                           gCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCgggg                                                    <  8:185183/148‑1 (MQ=255)                                                                                           gCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCgg                                                      <  2:84077/146‑1 (MQ=255)                                                                                             cTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGgc                                                 >  7:205366/1‑149 (MQ=255)                                                                                                 gcgGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGgctgc                                              <  8:284590/148‑1 (MQ=255)                                                                                                        aCATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAg                                       <  3:118856/148‑1 (MQ=255)                                                                                                        aCATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGa                                      <  4:199265/149‑1 (MQ=255)                                                                                                        aCATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGa                                      <  8:373183/149‑1 (MQ=255)                                                                                                         cATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCTCCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGAc                                     <  1:100609/149‑1 (MQ=255)                                                                                                         cATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGAc                                     <  4:170455/149‑1 (MQ=255)                                                                                                          ccaggcccacggctgccatttcaactacaccgccctgtgggccTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGAcc                                    >  8:241972‑M2/44‑149 (MQ=255)                                                                                                           caggcccacggctgccatttcaactacaccgccctgtgggccTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCt                                   >  7:79751‑M2/43‑149 (MQ=255)                                                                                                             GGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCtt                                  >  6:109464‑M1/1‑148 (MQ=255)                                                                                                               cccacggctgccatttcaactacaccgccctgtgggccTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTcgc                               <  8:79751‑M2/111‑1 (MQ=255)                                                                                                               CCCACAGGGCGGTGTAGGTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTcgc                               >  5:1146‑M1/1‑149 (MQ=255)                                                                                                                 CACAGGGCGGTGTAGTGGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCgg                             >  2:339994‑M1/1‑149 (MQ=255)                                                                                                                       gCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGc                       <  6:129538/149‑1 (MQ=255)                                                                                                                        cGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGcc                      >  3:322812/1‑149 (MQ=255)                                                                                                                             tAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGccc                 <  5:163050/149‑3 (MQ=255)                                                                                                                               gTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTcc                >  2:35960/1‑148 (MQ=255)                                                                                                                                ttGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCca              >  4:291482/1‑149 (MQ=255)                                                                                                                                ttGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCC‑GGGGGC‑GCTTTGCGCCCCTTCGCGGGCACGCCCGCTCCcacg            >  4:356310/1‑148 (MQ=37)                                                                                                                                 tGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCtgctgc                                           <  4:126728/119‑1 (MQ=255)                                                                                                                                 tGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCtgctgc                                           >  3:126728/1‑119 (MQ=255)                                                                                                                                  ctacaccgccctgtgggccTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCcaca            <  7:241972‑M2/130‑1 (MQ=255)                                                                                                                                   aaaTGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGAAGACCTTCGCGGACACGCCCGCTCCCACAg           <  1:35960/149‑1 (MQ=255)                                                                                                                                       ggCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACAGGTa        >  4:218837/1‑148 (MQ=255)                                                                                                                                         cAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACAGGTATcg     >  8:356301/1‑149 (MQ=255)                                                                                                                                          aGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACAGGTATcgc    <  7:356301/149‑1 (MQ=255)                                                                                                                                          aGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACAGGTATcgc    >  8:87685/1‑149 (MQ=255)                                                                                                                                           gCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACAGGTATcgcg   >  5:329858/1‑149 (MQ=255)                                                                                                                                            ccGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACAGGTATcgcgc  >  6:372861/1‑149 (MQ=255)                                                                                                                                            ccGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACAGGTATcgcgc  <  5:271996/149‑1 (MQ=255)                                                                                                                                            ccGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACAGGTATcgcgc  <  2:28554/149‑1 (MQ=255)                                                                                                                                            ccGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACAGGTATcgcgc  >  1:28554/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                            CTCGAAACCGAGGTTGCGCAAGATCTGCTGGAACTGCTGTTGTTTGCTGTCGCCACGATCGATGGCATAGGCCACGGCCTCGACGATCTGGCCTTCGCGGCTGACATCGGCCCACAGGGCGGTGTAGTTGAAATGGCAGCCGTGGGCCTGGCGCACGGTGTAGTAGAGGTTCTGCACATCGGCGAACAGCGCGATCTTTTTCACCTGGGAACCTCATTTTTGGCCTGGAGTGCCGGGGGGCTGCTGCGCAGACCTTCGCGGACACGCCCGCTCCCACAGGTATCGCGC  >  NC_002947/5430115‑5430402

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.