| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5526992 | 58 (0.890) | 3 (0.050) | 3/256 | NT | 5.1% | coding (505/1134 nt) | PP_4860 | mannose‑6‑phosphate isomerase |
| ? | NC_002947 | = 5527020 | 55 (0.870) | coding (533/1134 nt) | PP_4860 | mannose‑6‑phosphate isomerase | |||||
GCCGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5526841‑5526992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCAGTCTTCGCCCAGGCAGGCTTCGTACAGGCCATCGTCACGGGCGAACTGCTGGTCGATGATGTCCAGCGCGGCATTCAACGTGGACTCCACCAGGTTTTCGCGCACTTTGCCCCAGTAGTGCGCGCAGGCGAACACGATGAAGGCG < NC_002947/5527020‑5526874 GCCGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATG > 1:189163/1‑149GCCGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATG < 5:218113/149‑1GCCGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATG > 5:382985/1‑149 TCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGC < 5:179458/110‑1 TCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGC > 6:179458/1‑110 GTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCCAGTCTTCGCCCAGGCAGGCTTCGTACAGGCCATCGTCAC < 7:204807/149‑1 TACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCCAGTCTTCGCCCAGGCAGGCTTCGTACAGGCCATC < 7:178957/126‑1 TACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCCAGTCTTCGCCCAGGCAGGCTTCGTACAGGCCATC > 8:178957/1‑126 GGCCCAGTCTTCGCCCAGGCAGGCTTCGTACAGGCCATCGTCACGGGCGAACTGCTGGTCGATGATGTCCAGCGCGGCATTCAACGTGGACTCCACCA > 1:69943/1‑98 GGCCCAGTCTTCGCCCAGGCAGGCTTCGTACAGGCCATCGTCACGGGCGAACTGCTGGTCGATGATGTCCAGCGCGGCATTCAACGTGGACTCCACCA < 2:69943/98‑1 GCCCAGTCTTCGCCCAGGCAGGCTTCGTACAGGCCATCGTCACGGGCGAACTGCTGGTCGATGATGTCCAGCGCGGCATTCAACGTGGACTCCACCAGGTTTTCGCGCACTTTG‑CCCAGTAGTGCGCGCAGGCGAACACGATGAAGGCG > 1:23143/1‑149 CCAGTCTTCGCCCAGGCAGGCTTCGTACAGGCCATCGTCACGGGCGAACTGCTGGTCGATGATGTCCAGCGCGGCATTCAACGTGGACTCCACCAGGTTTTCGC > 7:62828/1‑104 CCAGTCTTCGCCCAGGCAGGCTTCGTACAGGCCATCGTCACGGGCGAACTGCTGGTCGATGATGTCCAGCGCGGCATTCAACGTGGACTCCACCAGGTTTTCGC < 8:62828/104‑1 GCCGCTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGTGGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5526841‑5526992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccCAGTCTTCGCCCAGGCAGGCTTCGTACAGGCCATCGTCACGGGCGAACTGCTGGTCGATGATGTCCAGCGCGGCATTCAACGTGGACTCCACCAGGTTTTCGCGCACTTTGCCCCAGTAGTGCGCGCAGGCGAACACGATGAAGGCG < NC_002947/5527020‑5526874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |