New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5526992	58 (0.890)	3 (0.050)	3/256	NT	5.1%	coding (505/1134 nt)	PP_4860	mannose‑6‑phosphate isomerase
	?	NC_002947	= 5527020	55 (0.870)					coding (533/1134 nt)	PP_4860	mannose‑6‑phosphate isomerase

CTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTGTGTC  >  NC_002947/5526845‑5527139                                                                                                                                                      |                                                                                                                                                      cTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCt                                                                                                                                                      <  5:323252/149‑1 (MQ=255)  tGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTg                                                                                                                                                     >  2:52022/1‑149 (MQ=255)    gACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑Ta                                                                                                                                                 <  3:186282/149‑1 (MQ=255)      ccGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACg                                                                                                                                               <  6:382985/149‑1 (MQ=255)        ggCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGaa                                                                                                                                             <  7:296168/149‑1 (MQ=255)         gcgcAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCAACGTTGAATGCCGCGATGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAg                                                                                                                                            >  6:36446/1‑149 (MQ=255)              aGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAgcctgc                                                                                                                                       <  2:110401/149‑1 (MQ=255)                gACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGAGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCAACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAgcctgcct                                                                                                                                     >  1:87995/1‑149 (MQ=255)                      aataCCCACGCCTTCCTCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGACTGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGc                                                                                                                                 <  8:90432/146‑1 (MQ=255)                        taCCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGaa                                                                                                                              <  4:390113/148‑1 (MQ=255)                        taCCCACGCCTTCATCGTGTTCGCCTGCGCGCACTAATGGTGCAAAGTTCTCGAAAACCTGG‑T‑GGAGTCCACGTTTAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTTACTATGGCCTG‑‑TACGAAGCCTGCCTGGGCGaa                                                                                                                              <  4:396510/148‑1 (MQ=255)                           ccACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGGATAGGAGTCCACTTTCAATCCCGCGCTGGACATCATCGACCAGCAGTTCCCCCGTGACGATGGCCTG‑‑TACGAAGCCTGACTGGGCGAAg                                                                                                                             >  1:115374/1‑148 (MQ=255)                           ccACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACt                                                                                                                          >  6:162181/1‑149 (MQ=255)                            cACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTg                                                                                                                         >  8:149511/1‑149 (MQ=255)                              cGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGG‑CAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGggc                                                                                                                      >  1:23143‑M2/1‑146 (MQ=255)                                        gtgtTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCcagtcttcgcccaggcaggcttcgtacaggccatcgtcac                                                                                                               <  7:204807‑M1/149‑41 (MQ=255)                                              gCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTg                                                                                                        <  4:334852/148‑1 (MQ=255)                                                 tGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGccc                                                                                                    >  5:121279/1‑149 (MQ=255)                                                      gcACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGc                                                                                               <  6:121279/149‑1 (MQ=255)                                                          tactGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCcagtcttcgcccaggcaggcttcgtacaggccatc                                                                                                                    >  8:178957‑M1/1‑91 (MQ=255)                                                          tactGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCcagtcttcgcccaggcaggcttcgtacaggccatc                                                                                                                    <  7:178957‑M1/126‑36 (MQ=255)                                                          tactGGGGCAAAGCGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTgg                                                                                                                                   >  5:301882/1‑109 (MQ=255)                                                          tactGGGGCAAAGCGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTgg                                                                                                                                   <  6:301882/109‑1 (MQ=255)                                                            ctGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATc                                                                                         >  8:233866/1‑149 (MQ=255)                                                             tGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATcc                                                                                        >  6:406378/1‑149 (MQ=255)                                                               gggCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCg                                                                                       <  2:115374/148‑1 (MQ=255)                                                                ggCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCAACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCg                                                                                       >  3:177990/1‑147 (MQ=255)                                                                 gCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAg                                                                                    <  5:223610/149‑1 (MQ=255)                                                                    aaGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGAt                                                                                  >  3:226901/1‑148 (MQ=255)                                                                      gTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCa                                                                               >  7:168661/1‑149 (MQ=255)                                                                        tcgcgATAACCTGT‑G‑GGAGTCCACGTTGAATGCCGCGCTGGATATCATCGACCAGGAGTTGGCCCGTGACGTTGGCCTG‑‑TTCGAAGCCTGCGTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCAc                                                                              <  4:226901/147‑1 (MQ=255)                                                                          gcgAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGg                                                                                                                        <  8:62828‑M2/104‑2 (MQ=255)                                                                          gcgAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGg                                                                                                                        >  7:62828‑M2/1‑103 (MQ=255)                                                                           cgAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTgg                                                                          >  7:33588/1‑149 (MQ=255)                                                                                aCCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGaa                                                                     <  7:149511/149‑1 (MQ=255)                                                                                   tgg‑t‑ggAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGggcc                                                                                                                     <  2:69943‑M2/98‑5 (MQ=255)                                                                                   tgg‑t‑ggAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGggcc                                                                                                                     >  1:69943‑M2/1‑94 (MQ=255)                                                                                          gAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTcc                                                              <  1:52022/148‑1 (MQ=255)                                                                                             tCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTGAATACGAAGCATGCATGGCCGAAGACTGGCCCCCCATCGGCAGTGGCCCCGTCAAGAATCCCCAAATGCCCATGGCCGAACCGTTcat                                                             >  1:116191/1‑146 (MQ=255)                                                                                              ccACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTcc                                                              <  8:113654/144‑1 (MQ=255)                                                                                              ccACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTcc                                                              >  7:113654/1‑144 (MQ=255)                                                                                               cACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAgg                                                        >  2:232441/1‑149 (MQ=255)                                                                                                aCGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAgg                                                        >  7:253867/1‑148 (MQ=255)                                                                                                aCGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAgg                                                        >  5:341010/1‑148 (MQ=255)                                                                                                   ttGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACt                                                    >  4:394364/1‑149 (MQ=255)                                                                                                      aaTGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGc                                                 >  5:290758/1‑149 (MQ=255)                                                                                                           cgctCTTGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTT‑‑TACGAAGCATGCCTTGGAGAAGACTGGTCCGACCTAGGCAGTGGCCCGGTGCAGAATCCGCAGATTCACCTGGCCGAAGATTTCCTGCAGGTACTGGCtgttc                                            <  5:309138/149‑3 (MQ=255)                                                                                                             cgcTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGt                                          <  2:200956/149‑1 (MQ=255)                                                                                                              gcTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTg                                         <  5:36446/149‑1 (MQ=255)                                                                                                                tGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGGCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGTCCGCTGAAGAATACGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTgac                                       >  4:13781/1‑149 (MQ=255)                                                                                                                tGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTgac                                       >  4:217251/1‑149 (MQ=255)                                                                                                                  gACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTgacga                                     <  2:26392/149‑1 (MQ=255)                                                                                                                     atcatcGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGacgacg                                   >  6:201531/1‑148 (MQ=255)                                                                                                                     atcatcGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCCGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGacgacg                                   >  1:375820/1‑148 (MQ=255)                                                                                                                      tcatcGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGTCTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGaa                                 <  5:406378/149‑1 (MQ=255)                                                                                                                      tcatcGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGaa                                 <  7:233866/149‑1 (MQ=255)                                                                                                                            aCCCGCAGTGCGCCGGTGACGATGGCCTG‑‑TACGCAGCCTGCCTGGGCGAAGACTGGGCCTACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTc                           <  8:168661/149‑1 (MQ=255)                                                                                                                             ccAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTcc                          <  3:217251/149‑1 (MQ=255)                                                                                                                               agcagTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGc                        >  6:291550/1‑149 (MQ=255)                                                                                                                                gcagTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGc                        >  4:296930/1‑148 (MQ=255)                                                                                                                                 cagTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGc                        >  6:336102/1‑147 (MQ=255)                                                                                                                                    ttCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTc                   <  2:87995/149‑1 (MQ=255)                                                                                                                                      cGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCg                  <  5:336102/148‑1 (MQ=255)                                                                                                                                        cccGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCgctg               >  7:96020/1‑149 (MQ=255)                                                                                                                                         ccGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCgctgc              <  8:96020/149‑1 (MQ=255)                                                                                                                                         ccGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCgctgc              >  1:223859/1‑149 (MQ=255)                                                                                                                                          cGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCgctgct             <  3:394364/149‑1 (MQ=255)                                                                                                                                           gTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGggccatcgtcacgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgccccagtagtgcgcgcaggcgaacac            <  7:204807‑M2/149‑110 (MQ=255)                                                                                                                                              aCGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCaa         >  6:83125/1‑149 (MQ=255)                                                                                                                                                gATGGCCTG‑‑TACGAAGCCTGGCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAAtt       <  2:116191/149‑1 (MQ=255)                                                                                                                                                gATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGggccatcgtcacgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgccccagta                              <  7:178957‑M2/126‑92 (MQ=255)                                                                                                                                                gATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGggccatcgtcacgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgccccagta                              >  8:178957‑M2/1‑35 (MQ=255)                                                                                                                                                  tGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATtgt     <  2:189163/149‑1 (MQ=255)                                                                                                                                                  tGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATtgt     <  5:201531/149‑1 (MQ=255)                                                                                                                                                   ggCCcagtcttcgcccaggcaggcttcgtacaggccatcgtcacgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccacca                                                         >  1:69943‑M1/1‑4 (MQ=255)                                                                                                                                                   ggCCcagtcttcgcccaggcaggcttcgtacaggccatcgtcacgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccacca                                                         <  2:69943‑M1/98‑95 (MQ=255)                                                                                                                                                    gCCcagtcttcgcccaggcaggcttcgtacaggccatcgtcacgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgcgcactttgcccagtagtgcgcgcaggcgaacacgatgaaggcg     >  1:23143‑M1/1‑3 (MQ=255)                                                                                                                                                     ccTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTGTGTc  <  5:162181/149‑1 (MQ=255)                                                                                                                                                      ccagtcttcgcccaggcaggcttcgtacaggccatcgtcacgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgc                                                <  8:62828‑M1/104‑104 (MQ=255)                                                                                                                                                      ccagtcttcgcccaggcaggcttcgtacaggccatcgtcacgggcgaactgctggtcgatgatgtccagcgcggcattcaacgtggactccaccaggttttcgc                                                >  7:62828‑M1/1‑1 (MQ=255)                                                                                                                                                      cTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTgtgt   >  7:83159/1‑147 (MQ=255)                                                                                                                                                      |                                                                                                                                                      CTGGACCGGCGCAAGGACCTGTATACCCACGCCTTCATCGTGTTCGCCTGCGCGCACTACTGGGGCAAAGTGCGCGAAAACCTGG‑T‑GGAGTCCACGTTGAATGCCGCGCTGGACATCATCGACCAGCAGTTCGCCCGTGACGATGGCCTG‑‑TACGAAGCCTGCCTGGGCGAAGACTGGGCCGACCTCGGCAGTGGCCCGCTGCAGAATCCGCAGATGCACCTGGCCGAAGCGTTCCTGCAGGTACTGGCTGTGCGTGACGACGAACATGTCCGCCAGTCGCTGCTGCAATTGTGTC  >  NC_002947/5526845‑5527139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.