New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5644528 =	62 (0.950)	4 (0.070)	4/248	NT	5.9%	intergenic (+9/‑120)	yhiN/PP_4954	FAD/NAD(P)‑binding domain‑containing oxidoreductase/membrane protein
	?	NC_002947	5644617 =	70 (1.150)					intergenic (+98/‑31)	yhiN/PP_4954	FAD/NAD(P)‑binding domain‑containing oxidoreductase/membrane protein

CGACGCAGTGACTGACGGAACGAGCTCGATGACATGATGGCCTGCCAGGCGGTGATCAGAAGAATACCTTTCAGGGCCGGTTATTGGGGCGCGCAGCGGCCCCAATAACGGCGCCAAGCACGGGCCAGCAAGAAGCGTTCCGTGCTGCTGAAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5644682‑5644528 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaaaggTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGCCCTCACCGGCAGCCTGGCCCTGTGCTGGTACC  >  NC_002947/5644617‑5644762                                                                                                                                                                                                                                                                                                               CGACGCAGTGACTGACGGAACGAGCTCGATGACATGATGGCCTGCCAGGCGGTGATCAGAAGAATACCTTTCAGGGCCGGTTATTGGGGCGCGCAGCGGCCCCAATAACGGCGCCAAGCACGGGCCAGCAAGAAGCGTTCCGTGCTGCT                                                                                                                                                          <  3:227356/149‑1   ACGCAGTGACTGACGGAACGAGCTCGATGACATGATGGCCTGCCAGGCGGTGATCAGAAGAATACCTTTCAGGGCCGGTTATTGGGGCGCGCAGCGGCCCCAATAACGGCGCCAAGCACGGGCCAGCAAGAAGCGTTCCGTGCTGCTG                                                                                                                                                         >  7:208328/1‑148      CAGTGACTGACGGAACGAGCTCGATGACATGATGGCCTGCCAGGCGGTGATCAGAAGAATACCTTTCAGGGCCGGTTATTGGGGCGCGCAGCGGCCCCAATAACGGCGCCAAGCACGGGCCAGCAAGAAGCGTTCCGTGCTGCTGAAAG                                                                                                                                                     <  1:203392/149‑1        GTGACTGACGGAACGAGCTCGATGACATGATGGCCTGCCAGGCGGTGATCAGAAGAATACCTTTCAGGGCCGGTTATTGGGGCGCGCAGCGGCCCCAATAACGGCGCCAAGCACGGGCCAGCAAGAAGCGTTCCGTGCTGCT                                                                                                                                                          <  5:329565/142‑1        GTGACTGACGGAACGAGCTCGATGACATGATGGCCTGCCAGGCGGTGATCAGAAGAATACCTTTCAGGGCCGGTTATTGGGGCGCGCAGCGGCCCCAATAACGGCGCCAAGCACGGGCCAGCAAGAAGCGTTCCGTGCTGCT                                                                                                                                                          >  6:329565/1‑142                                                            AAGAATACCTTTCAGGGCCGGTTATTGGGGCGCGCAGCGGCCCCAATAACGGCGCCAAGCACGGGCCAGCAAGAAGCGTTCCGTGCTGCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGT                                                                                                >  7:153052/1‑148                                                                ATACCTTTCAGGGCCGGTTATTGGGGCGCGCAGCGGCCCCAATAACGGCGCCAAGCACGGGCCAGCAAGAAGCGTTCCGTGCTGCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGT                                                                                            >  5:92438/1‑148                                                                                         GCGCGCAGCGGCCCCAATAACGGCGCCAAGCACGGGCCAGCAAGAAGCGTTCCGTGCTGCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGAC                                                                  <  6:92438/149‑1                                                                                                                                    GAAGCGTTCCGTGCTGCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGCCCTCACCGGCA                       <  8:153052/149‑1                                                                                                                                                    CTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGCCCTCACCGGCAGCCTGGCCCTGTGCTG       <  4:116444/149‑1                                                                                                                                                      GAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGCCCTCACCGGCAGCCTGGCCCTGTGCTGG      >  4:357447/1‑148                                                                                                                                                        AAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGCCCTCACCGGCAGCCTGGCCCTGTGCTGGTAC   <  8:174665/149‑1                                                                                                                                                         AGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGCCCTCACCGGCAGCCTGGCCCTGTGCTGGTACC  <  5:21165/149‑1                                                                                                                                                                                                                                                                                                               CGACGCAGTGACTGACGGAACGAGCTCGATGACATGATGGCCTGCCAGGCGGTGATCAGAAGAATACCTTTCAGGGCCGGTTATTGGGGCGCGCAGCGGCCCCAATAACGGCGCCAAGCACGGGCCAGCAAGAAGCGTTCCGTGCTGCTGAAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5644682‑5644528 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgaaaggTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCACTGCGTCGCCTGTGGGGCCAAGACAAGTTCAGCTACAGCATCCGGGTCACCATTGCCCTCACCGGCAGCCTGGCCCTGTGCTGGTACC  >  NC_002947/5644617‑5644762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.