New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5644528 =62 (0.950)4 (0.070) 4/248 NT 5.9% intergenic (+9/‑120) yhiN/PP_4954 FAD/NAD(P)‑binding domain‑containing oxidoreductase/membrane protein
?NC_002947 5644617 = 70 (1.150)intergenic (+98/‑31) yhiN/PP_4954 FAD/NAD(P)‑binding domain‑containing oxidoreductase/membrane protein

TCGTCCAAGACCATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCA  >  NC_002947/5644382‑5644674
                                                                                                                                                  |                                                                                                                                                   
tcgtcCAAGACCATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCt                                                                                                                                                   >  5:229024/1‑149 (MQ=255)
ggtaccagcacagggccaggctgccggtgagggcaatggtgacccggatgctgtagctgaacttgtcttggccccacaggcgacgcagtgactgacggaacgagctcgatgacatgatggcctgccaggcggtgatcagaagaataCCt                                                                                                                                                   <  5:21165‑M1/3‑1 (MQ=255)
 gtaccagcacagggccaggctgccggtgagggcaatggtgacccggatgctgtagctgaacttgtcttggccccacaggcgacgcagtgactgacggaacgagctcgatgacatgatggcctgccaggcggtgatcagaagaataCCtt                                                                                                                                                  <  8:174665‑M1/4‑1 (MQ=255)
  gtcCAAGACCATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCttt                                                                                                                                                 >  7:140465/1‑149 (MQ=255)
    ccagcacagggccaggctgccggtgagggcaatggtgacccggatgctgtagctgaacttgtcttggccccacaggcgacgcagtgactgacggaacgagctcgatgacatgatggcctgccaggcggtgatcagaagaataCCTTTc                                                                                                                                                >  4:357447‑M1/143‑148 (MQ=255)
     cagcacagggccaggctgccggtgagggcaatggtgacccggatgctgtagctgaacttgtcttggccccacaggcgacgcagtgactgacggaacgagctcgatgacatgatggcctgccaggcggtgatcagaagaataCCTTTcag                                                                                                                                              <  4:116444‑M1/8‑1 (MQ=255)
     cAAGACCATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTca                                                                                                                                               <  8:140465/148‑1 (MQ=255)
     cAAGACCATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTc                                                                                                                                                >  4:179569/1‑147 (MQ=255)
     cAAGACCATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTc                                                                                                                                                <  3:179569/147‑1 (MQ=255)
        gACCATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGATCGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTcagcag                                                                                                                                           >  5:354990/1‑149 (MQ=255)
        gACCATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTcagcag                                                                                                                                           >  1:27915/1‑149 (MQ=255)
        gACCATGGAATAGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTcagcag                                                                                                                                           >  6:202399/1‑149 (MQ=255)
           cATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCAc                                                                                                                                        <  5:136728/149‑1 (MQ=255)
           cATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCAc                                                                                                                                        >  7:35683/1‑149 (MQ=255)
           cATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCAc                                                                                                                                        >  6:343492/1‑149 (MQ=255)
           cATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGAAc                                                                                                                                        >  7:142203/1‑149 (MQ=255)
            aTGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACg                                                                                                                                       >  3:90152/1‑149 (MQ=255)
                     tgccggtgagggcaatggtgacccggatgctgtagctgaacttgtcttggccccacaggcgacgcagtgactgacggaacgagctcgatgacatgatggcctgccaggcggtgatcagaagaataCCTTTCAGCAGCACGGAACGcttc                                                                                                                              <  8:153052‑M1/24‑1 (MQ=255)
                      tGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGcttct                                                                                                                             >  6:77168/1‑149 (MQ=255)
                           aGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTg                                                                                                                        <  7:310911/149‑1 (MQ=255)
                            gCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTgg                                                                                                                       <  8:290988/149‑1 (MQ=255)
                               cGGGGTTGTACTTCATCGGTGAAGTGCTGTATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGccc                                                                                                                    >  1:236434/1‑149 (MQ=255)
                                  ggTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCagcagc                                                                                                                                          <  4:42713/124‑1 (MQ=255)
                                  ggTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCagcagc                                                                                                                                          >  3:42713/1‑124 (MQ=255)
                                   gTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGc                                                                                                                <  6:192916/149‑1 (MQ=255)
                                    ttGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCt                                                                                                               >  8:265311/1‑149 (MQ=255)
                                       tACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTg                                                                                                             <  2:114133/148‑1 (MQ=255)
                                       tACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTg                                                                                                             <  6:229024/148‑1 (MQ=255)
                                         cTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTg                                                                                                                           <  2:126747/132‑1 (MQ=255)
                                         cTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTg                                                                                                                           >  1:126747/1‑132 (MQ=255)
                                               cGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTa                                                                                                    >  8:140820/1‑149 (MQ=255)
                                                    aaGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTgg                                                                                                <  5:343492/148‑1 (MQ=255)
                                                       tGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACACCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGcc                                                                                           >  8:32041/1‑149 (MQ=255)
                                                        gCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCg                                                                                          >  8:106139/1‑149 (MQ=255)
                                                        gCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCCGCGAACGCCGCCGCCCAGTTCGTGTAGAGAAGAATCCTTAAAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTCGCGCCGTAATTGGGGCCg                                                                                          >  8:375779/1‑149 (MQ=255)
                                                                tCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTgcgcgc                                                                                  <  4:381603/149‑1 (MQ=255)
                                                                gtcttggccccacaggcgacgcagtgactgacggaacgagctcgatgacatgatggcctgccaggcggtgatcagaagaataCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTgcgcgc                                                                                  <  6:92438‑M1/67‑1 (MQ=255)
                                                                 cACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGcc                                                                                 >  6:42326/1‑149 (MQ=255)
                                                                 cACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGcc                                                                                 >  6:36435/1‑149 (MQ=255)
                                                                  aCCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGccc                                                                                <  7:140820/149‑1 (MQ=255)
                                                                  aCCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGccc                                                                                >  1:171599/1‑149 (MQ=255)
                                                                     ggCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCaa                                                                             <  7:106139/149‑1 (MQ=255)
                                                                      gCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCaa                                                                             >  3:306578/1‑148 (MQ=255)
                                                                       ccACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCGCGCAGCGGCCCCAATa                                                                           <  8:375685/149‑1 (MQ=255)
                                                                        cACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATaa                                                                          >  4:334531/1‑149 (MQ=255)
                                                                          ccTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAAcc                                                                        <  2:171599/149‑1 (MQ=255)
                                                                              ggcggcTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGcc                                                                    >  5:399514/1‑149 (MQ=255)
                                                                              ggcggcTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGc                                                                     <  6:354990/148‑1 (MQ=255)
                                                                                      cAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGaaa                                                              <  3:156888/147‑1 (MQ=255)
                                                                                       aaCTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTAtt                                                                                                  >  5:88134/1‑111 (MQ=255)
                                                                                       aaCTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTAtt                                                                                                  <  6:88134/111‑1 (MQ=255)
                                                                                          ttCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTAtt                                                        >  4:52135/1‑149 (MQ=255)
                                                                                          actgacggaacgagctcgatgacatgatggcctgccaggcggtgatcagaagaataCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTAt                                                         >  5:92438‑M1/57‑148 (MQ=255)
                                                                                             cAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTAttct                                                      <  6:399514/148‑1 (MQ=255)
                                                                                              acggaacgagctcgatgacatgatggcctgccaggcggtgatcagaagaataCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTAttctt                                                     >  7:153052‑M1/53‑148 (MQ=255)
                                                                                                   gCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGAt                                                >  1:209546/1‑148 (MQ=255)
                                                                                                     ttGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCAc                                             <  2:209546/149‑1 (MQ=255)
                                                                                                     ttGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCAc                                             >  8:208328/1‑149 (MQ=255)
                                                                                                           aTCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTg                                       <  3:334531/149‑1 (MQ=255)
                                                                                                                  aaCGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATtcttct                                                   <  3:34244/130‑1 (MQ=255)
                                                                                                                  aaCGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATtcttct                                                   >  4:34244/1‑130 (MQ=255)
                                                                                                                       cgccgcGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCcatcat                           <  8:292825/149‑1 (MQ=255)
                                                                                                                             gcAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATc                     <  7:32041/149‑1 (MQ=255)
                                                                                                                               aGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCa                                              >  7:117227/1‑122 (MQ=255)
                                                                                                                               aGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCa                                              <  8:117227/122‑1 (MQ=255)
                                                                                                                                     tgtAGAGTAGAATCCTTTCAGCAGCACGCAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGt             >  2:38432/1‑149 (MQ=255)
                                                                                                                                      gtagagtagaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGtt            >  6:170116/1‑149 (MQ=255)
                                                                                                                                       tagagtagaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTc           <  4:306578/149‑1 (MQ=255)
                                                                                                                                        agagtagaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTgc                                                                                      >  8:324853/1‑73 (MQ=255)
                                                                                                                                        agagtagaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTgc                                                                                      <  7:324853/73‑1 (MQ=255)
                                                                                                                                        agagtagaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTcc          >  2:214575/1‑149 (MQ=255)
                                                                                                                                           gtagaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCgt        >  7:174665/1‑148 (MQ=255)
                                                                                                                                             agaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCgtca      <  8:35683/148‑1 (MQ=255)
                                                                                                                                              gaATCCTTTCAGCAGCACGGAAGGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCgtcagt    <  5:202399/149‑1 (MQ=255)
                                                                                                                                              gaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCgtcagt    >  3:198474/1‑149 (MQ=255)
                                                                                                                                              gaATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCgtcagt    >  3:206224/1‑149 (MQ=255)
                                                                                                                                               aaTCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCAGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCGgtcagt    >  3:12964/1‑148 (MQ=255)
                                                                                                                                                aTCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGCGCTCGTTCCgtcagtca  >  3:244404/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
TCGTCCAAGACCATGGAATCGCTGAAAAGCCCGGGGTTGTACTTCATCGGTGAAGTGCTGGATGTCACCGGCCACCTGGGCGGCTTCAACTTCCAGTGGGCTTGGGCATCGGCGAACGCCGCCGCGCAGTTCGTGTAGAGTAGAATCCTTTCAGCAGCACGGAACGCTTCTTGCTGGCCCGTGCTTGGCGCCGTTATTGGGGCCGCTGCGCGCCCCAATAACCGGCCCTGAAAGGTATTCTTCTGATCACCGCCTGGCAGGCCATCATGTCATCGAGCTCGTTCCGTCAGTCA  >  NC_002947/5644382‑5644674

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.