| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5842554 = | 64 (0.980) | 4 (0.060) | 4/250 | NT | 6.3% | coding (1123/1431 nt) | calB | coniferyl aldehyde dehydrogenase |
| ? | NC_002947 | 5842578 = | 58 (0.940) | coding (1147/1431 nt) | calB | coniferyl aldehyde dehydrogenase | |||||
GCCGATGCCGCCGAAGGGCAGATCGTCCTGGGCAACATGCAGCAAGGTATCGTTCAGGCACACACCGCCGGAGTGGGTGTGACGCAGCACATGCTCCTGGGTGCGGCGGTCATAGCCAAAGAAGTACAGCGCCAATGGGTGTGGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5842703‑5842554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctgTACTTCTTTGGCTATGACCGCCGCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGGCGGTGTGTGCCTGAACGATACCTTGCTGCATGTTGCCCAGGACGATCTGCCCTTCGGCGGCATCGGCCCTTCAGGCATGGGCCAC > NC_002947/5842578‑5842721 GCCGATGCCGCCGAAGGGCAGATCGTCCTGGGCAACATGCAGCAAGGTATCGTTCAGGCACACACCGCCGGAGTGGGTGTGACGCAGCACATGCTCCTGGGTGCGGCGGTCATAGCCAAAGAAGTACAGCGCCAATGGGTGTGGGCGCT < 2:21850/149‑1GCCGATGCCGCCGAAGGGCAGATCGTCCTGGGCAACATGCAGCAAGGTATCGTTCAGGCACACACCGCCGGAGTGGGTGTGACGCAGCACATGCTCCTGGGTGCGGCGGTCATAGCCAAAGAAGTACAGCGCCAATGGGTGTGGGCGCT > 2:354470/1‑149 CCGATGCCGCCGAAGGGCAGATCGTCCTGGGCAACATGCAGCAAGGTATCGTTCAGGCACACACCGCCGGAGTGGGTGTGACGCAGCACATGCTCCTGGGTGCGGCGGTCATAGCCAAAGAAGTACAGCGCCAATGGGTGTGGGCGCTG > 6:47547/1‑149 CGAAGGGCAGATCGTCCTGGGCAACATGCAGCAAGGTATCGTTCAGGCACACACCGCCGGAGTGGGTGTGACGCAGCACATGCTCCTGGGTGCGGCGGTCATAGCCAAAGAAGTACAGCGCCAATGGGTGTGGGCGC > 8:385776/1‑137 CGAAGGGCAGATCGTCCTGGGCAACATGCAGCAAGGTATCGTTCAGGCACACACCGCCGGAGTGGGTGTGACGCAGCACATGCTCCTGGGTGCGGCGGTCATAGCCAAAGAAGTACAGCGCCAATGGGTGTGGGCGC < 7:385776/137‑1 GCAGATCGTCCTGGGCAACATGCAGCAAGGTATCGTTCAGGCACACACCGCCGGAGTGGGTGTGACGCAGCACATGCTCCTGGGTGCGGCGGTCATAGCCAAAGAAGTACAGCGCCCACACCCATTGGCGCTGTACTTCTTTGGCTATG < 2:252462/149‑1 CAAAGAAGTACAGCGCCAATGGGTGTGGGCGCTGTACTTCTTTGGCTATGACCGCCGCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGG < 5:68488/93‑1 CAAAGAAGTACAGCGCCAATGGGTGTGGGCGCTGTACTTCTTTGGCTATGACCGCCGCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGG > 6:68488/1‑93 GTACAGCGCCAATGGGTGTGGGCGCTGTACTTCTTTGGCTATGACCGCCGCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGGCGGTGTGTGCCTGAACGATACCTTGCTGCATGTTGCCCAGGACGATCTGCCCTTCGGCGGCAT > 3:311428/1‑149 GCGCTGTAATTCTTTGGCTATGACCGCCCCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGGCGGTGTGTGCCTGAACGATACCTTGCTGCATGTTGCCCAGGACCATCTGCCCTTCGGCGGCATCGGCCCTTCAGGCATGGGCC > 7:226689/1‑148 GCTGTACTTCTTTGGCTATGACCGCCGCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGGCGGTGTGTGCCTGAACGATACCTTGCTGCATGTTGCCCAGGACGATCTGCCCTTCGGCGGCATCGGCCCTTCAGGCATGGGCCAC > 3:194883/1‑148 CTGTACTTCTTTGGCTATGACCGCCGCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGGCGGTGTGTGCCTGAACGATACCTTGCTGCATGTTGCCCAGGACGATCTGCCCTTCGG > 5:63192/1‑119 CTGTACTTCTTTGGCTATGACCGCCGCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGGCGGTGTGTGCCTGAACGATACCTTGCTGCATGTTGCCCAGGACGATCTGCCCTTCGG < 6:63192/119‑1 CTGTACTTCTTTGGCTATGACCGCCGCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGGCGGTGTGTGCCTGAACGATACCTTGCTGCATGTTGCCCAGGACGATCTGCCCTTCGG > 7:237000/1‑119 CTGTACTTCTTTGGCTATGACCGCCGCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGGCGGTGTGTGCCTGAACGATACCTTGCTGCATGTTGCCCAGGACGATCTGCCCTTCGG < 8:237000/119‑1 GTACTTCTTTGGCTATGACCGCCGCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGGCGGTGTGTGCCTGAACGATACCTTGCTGCATGTTGCCCAGGACGATCTGCCC < 6:28885/112‑1 GTACTTCTTTGGCTATGACCGCCGCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGGCGGTGTGTGCCTGAACGATACCTTGCTGCATGTTGCCCAGGACGATCTGCCC > 5:28885/1‑112 GCCGATGCCGCCGAAGGGCAGATCGTCCTGGGCAACATGCAGCAAGGTATCGTTCAGGCACACACCGCCGGAGTGGGTGTGACGCAGCACATGCTCCTGGGTGCGGCGGTCATAGCCAAAGAAGTACAGCGCCAATGGGTGTGGGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5842703‑5842554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctgTACTTCTTTGGCTATGACCGCCGCACCCAGGAGCATGTGCTGCGTCACACCCACTCCGGCGGTGTGTGCCTGAACGATACCTTGCTGCATGTTGCCCAGGACGATCTGCCCTTCGGCGGCATCGGCCCTTCAGGCATGGGCCAC > NC_002947/5842578‑5842721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |