| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5850864 | 44 (0.680) | 4 (0.070) | 4/248 | NT | 7.6% | coding (1569/1842 nt) | ilvD | dihydroxy‑acid dehydratase |
| ? | NC_002947 | = 5850932 | 56 (0.920) | coding (1637/1842 nt) | ilvD | dihydroxy‑acid dehydratase | |||||
ACATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5850710‑5850864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgatcAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGACT < NC_002947/5850932‑5850788 ACATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTG < 7:73659/149‑1 CATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGT < 2:350862/149‑1 CATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGT < 5:27257/149‑1 CGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGA > 6:173930/1‑149 CAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCC > 8:116794/1‑149 TCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGA < 7:116794/149‑1 TGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGG > 7:160510/1‑143 TGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGG < 8:160510/143‑1 GATCAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGACT > 8:191220/1‑149 ACATCGTCATCATCCGCTACGAAGGCCCGAAAGGCGGCCCGGGCATGCAAGAAATGCTCTACCCGACCTCGTACCTCAAGTCCAAAGGCCTGGGCAAGGCCTGCGCCCTGCTCACCGACGGTCGCTTCTCGGGCGGTACCTCGGGCCTGTCGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5850710‑5850864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgatcAGTACCTTGTCGCCGTCGCGCACCAGGCCGATGGCGCCGCCCGCCGCGGCCTCTGGCGAGGCGTGGCCGATCGACAGGCCCGAGGTACCGCCCGAGAAGCGACCGTCGGTGAGCAGGGCGCAGGCCTTGCCCAGGCCTTTGGACT < NC_002947/5850932‑5850788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |