| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5890484 = | 60 (0.920) | 4 (0.060) | 4/250 | NT | 6.8% | coding (2139/2367 nt) | PP_5164 | penicillin amidase family protein |
| ? | NC_002947 | 5890539 = | 53 (0.860) | coding (2194/2367 nt) | PP_5164 | penicillin amidase family protein | |||||
CACATACCCCTCGGCCTGGTCCGCGTAATGCCGGTCGAACGGCACGCCACTCTGCCCGACCGGGTTGATGGTCAGCGCCTGCCCGGCATCGGCAAAGTCGATCAGCCGCCGCGTCGACGGCCCATAGGTCACCGGCCATGGCGCAGAGCTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5890637‑5890484‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgatcGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATCAGCGGGCGCAGATGGGGGTGAT > NC_002947/5890539‑5890672 CACATACCCCTCGGCCTGGTCCGCGTAATGCCGGTCGAACGGCACGCCACTCTGCCCGACCGGGTTGATGGTCAGCGCCTGCCCGGCATCGGCAAAGTCGATCAGCCGCCGCGTCGACGGCCCATAGGTCACCGGCCATGGCGCAGAGC > 5:341686/1‑149 ATACCCCTCGGCCTGGTCCGCGTAATGCCGGTCGAACGGCACGCCACTCTGCCCGACCGGGTTGATGGTCAGCGCCTGCCCGGCATCGGCAAAGTCGATCAGCCGCCGCGTCGACGGCCCATAGGTCACCGGCCATGGCGCAGAGCTGA > 4:269407/1‑149 TACCCCTCGGCCTGGTCCGCGTAATGCCGGTCGAACGGCACGCCACTCTGCCCGACCGGGTTGATGGTCAGCGCCTGCCCGGCATCGGCAAAGTCGATCAGCCGCCGCGTCGACGGCCCATAGGTCACCGGCCATGGCGCAGAGCTGAT < 3:36270/149‑1 CAAAGTCGATCAGCCGCCGCGTCGACGGCCCATAGGTCACCGGCCATGGCGCAGAGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCC > 4:256209/1‑149 GCCGCCGCGTCGACGGCCCATAGGTCACCGGCCATGGCGCAGAGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTG > 7:318208/1‑149 TCGACGGCCCATAGGTCACCGGCCATGGCGCAGAGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAG < 3:256209/149‑1 GCGCAGAGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATCAGCGGGCGCAGATGGGGGTGAT < 8:318208/148‑1 TGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATCAGCGG < 4:3656/122‑1 CACATACCCCTCGGCCTGGTCCGCGTAATGCCGGTCGAACGGCACGCCACTCTGCCCGACCGGGTTGATGGTCAGCGCCTGCCCGGCATCGGCAAAGTCGATCAGCCGCCGCGTCGACGGCCCATAGGTCACCGGCCATGGCGCAGAGCTGATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5890637‑5890484‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgatcGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATCAGCGGGCGCAGATGGGGGTGAT > NC_002947/5890539‑5890672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |