New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5890484 =60 (0.920)4 (0.060) 4/250 NT 6.8% coding (2139/2367 nt) PP_5164 penicillin amidase family protein
?NC_002947 5890539 = 53 (0.860)coding (2194/2367 nt) PP_5164 penicillin amidase family protein

CTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATCAGCGGGCGCAGATGGGGGTGAT  >  NC_002947/5890392‑5890672
                                                                                                                                                   |                                                                                                                                     
cTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGa                                                                                                                                      <  4:148512/149‑1 (MQ=255)
cTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGa                                                                                                                                      <  4:154486/149‑1 (MQ=255)
   ggggTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGAc                                                                                                                                     <  1:400774/147‑1 (MQ=255)
     ggcctggtccgcgtaatgccggtcgaacggcacgccactctgcccgaccgggttgatggtcagcgcctgcccggcatcggcaaagtcGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTg                                                                                                                                 >  4:256209‑M1/88‑149 (MQ=255)
     ggTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTg                                                                                                                                 >  6:151635/1‑149 (MQ=255)
      gTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGc                                                                                                                                <  2:170578/149‑1 (MQ=255)
         aaaaaGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGa                                                                                                                             >  6:58302/1‑149 (MQ=255)
           aaaGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATg                                                                                                                           >  1:76084/1‑149 (MQ=255)
                          gctgTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGa                                                                                                            >  5:11140/1‑149 (MQ=255)
                           ctgTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCTGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGa                                                                                                            <  1:398662/148‑1 (MQ=255)
                           ctgTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTg                                                                                                             <  7:38815/147‑1 (MQ=255)
                              ttCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGAcc                                                                                                          <  6:174768/147‑1 (MQ=255)
                                cAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATc                                                                                                       <  2:76084/148‑1 (MQ=255)
                                   cGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAAcc                                                                                                   <  4:253032/149‑1 (MQ=255)
                                       gggCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCgg                                                                                                <  5:58302/148‑1 (MQ=255)
                                          ccATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCgg                                                                                            <  4:137810/149‑1 (MQ=255)
                                            aTTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCggg                                                                                           >  3:269407/1‑148 (MQ=255)
                                                gccgcACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCagag                                                                                      >  7:223260/1‑149 (MQ=255)
                                                 ccgcACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGt                                                                                     >  7:117601/1‑149 (MQ=255)
                                                  cgcACCCGGTACCGATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTg                                                                                    <  3:220330/149‑1 (MQ=255)
                                                  cgcACCCGGTACCCATGAAGTGCCGAACAACCTCTCTGCGAAGATCAGATCTGCGCCATGGCCGGTGACCTATGGGCAGTCGACGCGGAGGCTGATCGACTTTGCCGATGACGGGAAGGCGCTGAACATCAACCCGGTCTGGCAGAGTg                                                                                    >  3:204649/1‑149 (MQ=255)
                                                      cccGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGAGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGAGGAAGATCGACTTTGCCGATGCCGGGCAGGCGATGACCATCAACCCCGTCGGTCAGCGTGGCGt                                                                                >  1:117079/1‑149 (MQ=255)
                                                       ccGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTg                                                                               >  6:341686/1‑149 (MQ=255)
                                                       ccGGTACACATGAAGTGCCGAACAAACTCTCGGCTAAGATCAGCTCTGCGCCATGGCCGGTGAACTATGGGCCGTCGACGCTGCGGCTGATCGACTTTGCCGATGCCGGGCAGGAGCTTACCATCAACACGTTCGTGCAGAGTGGCGTg                                                                               >  7:166048/1‑149 (MQ=255)
                                                           tACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGt                                                                           <  8:117601/149‑1 (MQ=255)
                                                           tACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGt                                                                           <  6:164372/149‑1 (MQ=255)
                                                              ccATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTc                                                                         >  8:162219/1‑148 (MQ=255)
                                                               cATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGa                                                                       >  6:399167/1‑149 (MQ=255)
                                                                 tGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGAcc                                                                     <  1:240763/149‑1 (MQ=255)
                                                                 tGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGAcc                                                                     <  5:220526/149‑1 (MQ=255)
                                                                   aaGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCgg                                                                   <  1:101293/149‑1 (MQ=255)
                                                                    aGTTCCGAACAACCTCTCGGCTAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGTCTTATCTACTTTGCCGATGCCGTGCAGGAGCTTAACATCAACCCGGTCGGTCAGAGTGGCTTTCCGTTCGACCGGc                                                                  <  4:204649/149‑1 (MQ=255)
                                                                          gAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTAcg                                                            >  8:350697/1‑149 (MQ=255)
                                                                            acaacCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTAcgcg                                                          <  8:22592/149‑1 (MQ=255)
                                                                             caacCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGAc                                                                                                           <  7:249699/99‑1 (MQ=255)
                                                                             caacCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGAc                                                                                                           >  8:249699/1‑99 (MQ=255)
                                                                              aacCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGa                                                        >  3:45134/1‑149 (MQ=255)
                                                                                  tctcGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAg                                                    >  1:318772/1‑149 (MQ=255)
                                                                                     caaagtcgatcagccgccgcgtcgacggcccataggtcaccggccatggcgcagagctgatcGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGcc                                                 >  4:256209‑M2/63‑149 (MQ=255)
                                                                                       gCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGa                                               <  2:318772/149‑1 (MQ=255)
                                                                                             ATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTa                                         <  3:36270‑M1/149‑1 (MQ=255)
                                                                                              TCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTAt                                        >  4:269407‑M1/1‑149 (MQ=255)
                                                                                                 gccgccgcgtcgacggcccataggtcaccggccatggcgcagagctgatcGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTAtgtg                                     >  7:318208‑M2/51‑149 (MQ=255)
                                                                                                 GCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTAtgtg                                     >  5:341686‑M1/1‑149 (MQ=255)
                                                                                                   tctGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGCCCGGCATTACGCGGACCAGGCCGAGGGGTAtgtg                                     >  5:156694/1‑147 (MQ=255)
                                                                                                      gcgcCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAggg                                >  3:15615/1‑149 (MQ=255)
                                                                                                       cgcCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAgggg                               <  5:399167/149‑1 (MQ=255)
                                                                                                       cgcCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAgggg                               <  5:243151/149‑1 (MQ=255)
                                                                                                       cgcAATGGCCGGTGACCTATTGGCCGTAGACGCTGCGGCTTATCGACTTTGCCGATGCCGTGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGATTGTTATGTGCAggg                                <  8:166048/148‑1 (MQ=255)
                                                                                                        gcCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTTCCGTTCGCCCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAcggg                               >  2:194581/1‑148 (MQ=255)
                                                                                                          tcgacggcccataggtcaccggccatggcgcagagctgatcGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAg                            <  3:256209‑M2/108‑1 (MQ=255)
                                                                                                             ggCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCa                             >  4:61568/1‑145 (MQ=255)
                                                                                                             ggCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCa                             <  3:61568/145‑1 (MQ=255)
                                                                                                              gCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATc                        <  7:350697/149‑1 (MQ=255)
                                                                                                                   tGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGTCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATCAGCgg                   <  5:151635/149‑1 (MQ=255)
                                                                                                                   tGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATCAGCgg                   <  4:15615/149‑1 (MQ=255)
                                                                                                                       cTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATCAGCGGgcg                >  7:104290/1‑148 (MQ=255)
                                                                                                                        tATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCGGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATCAGCGGgcg                >  8:83372/1‑147 (MQ=255)
                                                                                                                        tATGGGCCGTCGACGCGGCGGCTGATAGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTTCAGGGGCAGTATCAGCGGgcg                >  5:248320/1‑147 (MQ=255)
                                                                                                                                 tCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAg                                              <  4:103598/108‑1 (MQ=255)
                                                                                                                                 tCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAg                                              >  3:103598/1‑108 (MQ=255)
                                                                                                                                 tCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAg                                              <  2:34065/108‑1 (MQ=255)
                                                                                                                                 tCGACGCGGCGGCTGATCGACTTTGCCGATCCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAg                                              >  1:34065/1‑108 (MQ=255)
                                                                                                                                     gcgcagagctgatcGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATCAGCGGGCGCAGATGGGGGTGAt  <  8:318208‑M2/134‑1 (MQ=255)
                                                                                                                                              tgatcGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATCAGCgg                   <  4:3656‑M2/117‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                     
CTTGGGGTGAAAAAGCCGCTGAACCTGCTGTTCAACGTTGGGCCATTCGCCGCACCCGGTACCCATGAAGTGCCGAACAACCTCTCGGCGAAGATCAGCTCTGCGCCATGGCCGGTGACCTATGGGCCGTCGACGCGGCGGCTGATCGACTTTGCCGATGCCGGGCAGGCGCTGACCATCAACCCGGTCGGGCAGAGTGGCGTGCCGTTCGACCGGCATTACGCGGACCAGGCCGAGGGGTATGTGCAGGGGCAGTATCAGCGGGCGCAGATGGGGGTGAT  >  NC_002947/5890392‑5890672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.