New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5924551	51 (0.780)	3 (0.060)	3/214	NT	7.4%	intergenic (‑121/+76)	gcvP‑II/gcvH‑II	glycine dehydrogenase/glycine cleavage system protein H
	?	NC_002947	= 5924587	34 (0.650)					intergenic (‑157/+40)	gcvP‑II/gcvH‑II	glycine dehydrogenase/glycine cleavage system protein H

AGAAACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5924381‑5924551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcggctaaagccgctcctacaCAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGGAAG  <  NC_002947/5924587‑5924442                                                                                                                                                                                                                                                                                                                               AGAAACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCTACTGGGACATGACGACGCTCTCTTCATAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCAGATTGTGCGGTGAAACTTTTTTGCAGTCCAGGCATCTT                                                                                                                                                                          >  1:31857/1‑149      CGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGG                                                                                                                                                                     <  8:66226/149‑1         GTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCT                                                                                                                                                                   >  3:19748/1‑148           TGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAA                                                                                                                                                                <  6:105810/149‑1           TGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTA                                                                                                                                                                  >  7:78254/1‑147             AGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAG                                                                                                                                                               <  2:99942/148‑1                 CTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGG                                                                                                                                                                     <  6:103610/138‑1                 CTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGG                                                                                                                                                                     >  5:103610/1‑138                  TTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTC                                                                                                                                                         >  4:76987/1‑149                  TTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTC                                                                                                                                                         >  6:171013/1‑149                  TTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTC                                                                                                                                                         >  2:245514/1‑149                   TGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCGATTCGCGGCTAAAGCCGATCC                                                                                                                                                        >  6:285001/1‑149                                     GGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTC                                                                                                                                                                         <  4:252508/114‑1                                     GGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTC                                                                                                                                                                         >  3:252508/1‑114                                                        CGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGC                                                                                                                   >  5:356520/1‑149                                                                  CTAGACGAGGCCTCATCGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTGTTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTGGAGACGGGTGCAGCCCCTGTAGGA                                                                                                         <  8:114216/149‑1                                                                     GACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGC                                                                                                       <  6:356520/148‑1                                                                                                                                                    TTCGCGGCTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTC                       >  4:278793/1‑149                                                                                                                                                    TTCGCGGCTAAAGCCGCTACTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCGTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGGTTCCCCGCACCATCGGCAATCCCTTCCTAGACTTGTAAGTTTC                       >  2:282501/1‑149                                                                                                                                                         ggaTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGGGCAGCCCCTGTCGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGA                  <  2:224004/146‑1                                                                                                                                                           CTAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGG                >  4:194931/1‑149                                                                                                                                                            TAAAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGC               >  5:171013/1‑149                                                                                                                                                              AAGCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGC               <  7:307286/147‑1                                                                                                                                                                GCCGCTCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGG           <  8:202802/149‑1                                                                                                                                                                    CTCCTACACAGTTACAGCACTGCATTCGTGACGGGTGCAGCCCCTGTATGTGGGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTA       <  7:163038/149‑1                                                                                                                                                                    CTCCTACACAGGTACAGCACTGCATTCGATACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTA       <  3:278793/149‑1                                                                                                                                                                     TCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAG      >  3:70893/1‑149                                                                                                                                                                     TCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTG            >  3:213404/1‑143                                                                                                                                                                     TCCTACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTG            <  4:213404/143‑1                                                                                                                                                                      CCTACACAGGTACACCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGG     <  4:370469/149‑1                                                                                                                                                                        TACACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGG     >  7:147788/1‑147                                                                                                                                                                          CACAGTTACAGCACTGCATTCGATACGGGTGAATCCCCTTTAGGAGCTGCTTTAGCCGCTAAGAGGCCGGGCCTGCAAACAAGTTTCCCATCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATTAGGCCTTGTCTAGGAAG  <  6:98099/148‑1                                                                                                                                                                          CACAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGGAA   >  3:256461/1‑147                                                                                                                                                                                                                                                                                                                               AGAAACGGGTTGAGCTCTTGCAGTTGATGCAGGGATGGCGACTGGGACATGACGACGCTCTCTTCCTAGACCAGGCCTCATGGAAACTTACAAGTCTAGGAAGGGATTGCCGATTGTGCGGGGAAACTTGTTTGCAGGCCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5924381‑5924551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcgcggctaaagccgctcctacaCAGGTACAGCACTGCATTCGAGACGGGTGCAGCCCCTGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGGCCTGCAAACAAGTTTCCCCGCACAATCGGCAATCCCTTCCTAGACTTGTAAGTTTCCATGAGGCCTGGTCTAGGAAG  <  NC_002947/5924587‑5924442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.