| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5943601 = | 47 (0.720) | 3 (0.060) | 3/220 | NT | 8.9% | intergenic (+9/+76) | PP_5210/PP_5211 | alcohol dehydrogenase/ChaC‑related protein |
| ? | NC_002947 | 5943666 = | 22 (0.410) | intergenic (+74/+11) | PP_5210/PP_5211 | alcohol dehydrogenase/ChaC‑related protein | |||||
GAGCAGACCTTGAATGCACTGCGCAGTCACCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5943769‑5943601‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtttacccgcgaagaggccgGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCA > NC_002947/5943666‑5943813 GAGCAGACCTTGAATGCACTGCGCAGTCACCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGG < 7:300874/149‑1GAGCAGACCTTGAATGCACTGCGCAGTCACCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGG < 3:216732/149‑1 ACCTTGAATGCACTGCGCAGTCACCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGGTAAAACCTGCACGGTCGCCTGTAGGAGCGGGTTTAC > 1:253584/1‑149 CCTTGAATGCACTGCGCAGTCACCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACC < 5:389822/149‑1 CTTGAATGCACTGCGCAGTCACCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCC > 5:74688/1‑149 CTTGAATGCACTGCGCAGTCACCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGG < 6:381142/141‑1 CTTGAATGCACTGCGCAGTCACCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGG > 5:381142/1‑141 gatTGCACTGCGCATTCACGAGATGCCAGATAGCCACGTTGAAGCGCGCTTCAGGCGTTGCCACAATCTGAGCGAAGTGTGAGCAACCTGTTCCGTCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTTTAGGACCGGGTTTACCCGC < 3:38362/145‑1 AATGCACTGCGCAGTCACCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGA < 5:8892/149‑1 TGCACTGCGCAGTCACCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAG < 5:387203/149‑1 CACTGCGCAGTCACCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGA < 2:253584/148‑1 CCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGATAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGC > 8:81573/1‑130 CCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGATAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGC < 7:81573/130‑1 CCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACC > 1:161895/1‑59 CCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACC < 2:161895/59‑1 TTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGC < 2:152062/142‑1 TTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGC > 1:152062/1‑142 CGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTC > 2:67479/1‑147 GGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGC < 2:233748/139‑1 GGGTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGC > 1:233748/1‑139 GTTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAA < 2:226765/149‑1 TTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCC < 7:279498/134‑1 TTTACCCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCC > 8:279498/1‑134 CCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCC > 2:84324/1‑149 CCGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATAGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCC > 2:90103/1‑149 CGCGAAGAGGCCGGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCT > 3:377762/1‑149 GCCGGAACAGGTTGCTGACTCTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCGAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTG < 4:38362/148‑1 GGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCA < 3:314568/149‑1 GAGCAGACCTTGAATGCACTGCGCAGTCACCAGATGCCCGATCGCAACCTGGAAGCGCGATTCAGGCGTTGCCACAATCTGCGCGAAGTGTGAGCAACCTGTTCCGGCCTCTTCGCGGGTAAACCCTGCACGGTCGCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5943769‑5943601‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggtttacccgcgaagaggccgGAACAGGTTGCTCACACTTCGCGCAGATTGTGGCAACGCCTGAATCGCGCTTCCAGGTTGCGATCGGGCATCTGGTGACTGCGCAGTGCATTCAAGGTCTGCTCGACATACTCCCGCGTGGTGCCATAACGCCCCTTGGCACTGGCCA > NC_002947/5943666‑5943813 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |