| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5971553 | 72 (1.110) | 4 (0.060) | 4/250 | NT | 5.3% | coding (133/222 nt) | PP_5237 | hypothetical protein |
| ? | NC_002947 | = 5971603 | 75 (1.220) | coding (183/222 nt) | PP_5237 | hypothetical protein | |||||
CCTGAAAAACCACGACGCACACTTGTTGCGCCGGCGTTGGCAGCACTGGCTATTCTTTGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5971399‑5971553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccggGCGCAACTTCCCCGACAGGCCGTTGGCCAGGTCGGTTTCGACGCTGACCGCCGGTGCCTGCACGCCTACCTGGGCGCGGCTGTGGACGAGGGCTAGAGACATGAACACTCCGTTGTTGCTGGAAAATGCCGCTTCCTGCGGCTGGG < NC_002947/5971603‑5971458 CCTGAAAAACCACGACGCACACTTGTTGCGCCGGCGTTGGCAGCACTGGCTATTCTTTGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCGACAGCCGCGCCCAGGTAGGCGTGCAGG < 1:58362/149‑1CCTGAAAAACCACGACGCACACTTGTTGCGCCGGCGTTGGCAGCACTGGCTATTCTTTGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGG > 4:173095/1‑149 TGAAAAACCACGACGCACACTTGTTGCGCCGGCGTTGGCAGCACTGGCTATTCTTTGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCA > 8:81187/1‑149 AAAACCACGACGCACACTTGTTGCGCCGGCGTTGGCAGCACTGGCTATTCTTTGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCG > 6:159243/1‑149 TTGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGGCGCAACTTCCCCGACAGGCCGTTGGCCAGGTCGGTTTCGACGCTGACCG > 4:144446/1‑149 GCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGGCGCAACTTCCCCGACAGGCCGTTGGCCAGGTCGGTTTCGACGCTGACCGCCGGTGC < 3:144446/149‑1 CCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGGCGCAACTTCCCCGACAGGCCGTTGGCCAGGTCGGTTTCGACGCTGACCGCCGGTGCC < 3:29876/149‑1 GCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGGCGCAACTTCCCCGACAGGCCGTTGGCCAGGTCGGTTTCGACGCTGACCGCCGGTGCCTG < 1:204812/149‑1 CCGGGCGCAACTTCCCCGACAGGCGGTTGGCCAGGTCGGTTTCGACGCTGACCGCCGGTGCCTGCACGCCTACCTGGGCGCGGCTGTGGACGAGGGCTAGAGACATGAACACTCCGTTGTTGCTGGAAAATGCCGCTTCCTGCGGCTGG < 7:84397/149‑1 CGGGCGCAACTTCCCCGACAGGCCGTTGGCCAGGTCGGTTTCGACGCTGACCGCCGGTGCCTGCACGCCTACCTGGGCGCGGCTGTGGACGAGGGCTAGAGACATGAACACTCCGTTGTTGCTGGAAAATGCCGCTTCCTGCGGCTGGG < 1:114335/149‑1 CCTGAAAAACCACGACGCACACTTGTTGCGCCGGCGTTGGCAGCACTGGCTATTCTTTGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5971399‑5971553‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccggGCGCAACTTCCCCGACAGGCCGTTGGCCAGGTCGGTTTCGACGCTGACCGCCGGTGCCTGCACGCCTACCTGGGCGCGGCTGTGGACGAGGGCTAGAGACATGAACACTCCGTTGTTGCTGGAAAATGCCGCTTCCTGCGGCTGGG < NC_002947/5971603‑5971458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |