New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 597155372 (1.110)4 (0.060) 4/250 NT 5.3% coding (133/222 nt) PP_5237 hypothetical protein
?NC_002947 = 5971603 75 (1.220)coding (183/222 nt) PP_5237 hypothetical protein

TTGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAGGCAAAAAGCTAGC  >  NC_002947/5971455‑5971749
                                                                                                                                                       |                                                                                                                                                  
ttGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTgcgc                                                                                                                                                    >  8:366029/1‑149 (MQ=255)
   cccAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCccg                                                                                                                                                 <  1:114335‑M2/149‑4 (MQ=255)
    ccAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACCGCCTGTCGGGGAAGTTGCGCccgg                                                                                                                                                <  7:84397‑M2/149‑5 (MQ=255)
         cGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCTCTGTCGGGGAAGTTGCGCCCGGTGCa                                                                                                                                            <  1:210971/149‑1 (MQ=255)
            aGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAgc                                                                                                                                        <  4:209300/149‑1 (MQ=255)
             ggAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAgcg                                                                                                                                       <  2:17661/149‑1 (MQ=255)
              gAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCCACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAgcgg                                                                                                                                      >  2:347659/1‑149 (MQ=255)
              gAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAgcgg                                                                                                                                      >  8:336360/1‑149 (MQ=255)
                      aTTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGcggcggcgg                                                                                                                                >  8:152878/1‑147 (MQ=255)
                                 acaacGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCg                                                                                                                   <  2:371510/149‑1 (MQ=255)
                                  caacGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCg                                                                                                                   >  8:146648/1‑148 (MQ=255)
                                  caacGGAGTGTGCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGa                                                                                                                  <  6:284615/149‑1 (MQ=255)
                                   aacGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGaa                                                                                                                 <  7:101599/149‑1 (MQ=255)
                                     cGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAAt                                                                                                               <  6:9178/149‑1 (MQ=255)
                                        aGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCg                                                                                                                   >  6:41099/1‑142 (MQ=255)
                                        aGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCg                                                                                                                   <  5:41099/142‑1 (MQ=255)
                                        aGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGc                                                                                                            <  6:175777/149‑1 (MQ=255)
                                          tgtTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGGAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAATCGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCt                                                                                                           <  1:120366/149‑1 (MQ=255)
                                           catCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGc                                                                                                         <  6:268082/147‑1 (MQ=255)
                                            ttCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGc                                                                                                         >  3:319271/1‑148 (MQ=255)
                                            ttCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGc                                                                                                         >  3:75742/1‑148 (MQ=255)
                                               aTGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCTCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCaaaa                                                                                                     <  1:297941/149‑1 (MQ=255)
                                               aTGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCaaa                                                                                                      >  3:319060/1‑148 (MQ=255)
                                                 gTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAgcggcgg                                                                                                                                   <  2:317527/117‑1 (MQ=255)
                                                 gTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAgcggcgg                                                                                                                                   >  1:317527/1‑117 (MQ=255)
                                                 gTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAAt                                                                                                   >  1:185770/1‑149 (MQ=255)
                                                    tctAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCg                                                                                                >  4:34374/1‑149 (MQ=255)
                                                      tAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCGCGGTGCAGAgcggc                                                                                                                                     <  4:220208/110‑1 (MQ=255)
                                                      tAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAgcggc                                                                                                                                     >  3:220208/1‑110 (MQ=255)
                                                      tAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTc                                                                                                 <  3:75674/146‑1 (MQ=255)
                                                      tAGCCCTAGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTc                                                                                                 <  5:357313/146‑1 (MQ=255)
                                                        gCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGa                                                                                              <  4:226308/147‑1 (MQ=255)
                                                         cccTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACTGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTa                                                                                           <  8:84397/149‑1 (MQ=255)
                                                         cccTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGAc                                                                                             >  7:100900/1‑147 (MQ=255)
                                                          ccTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAg                                                                                          <  8:100900/149‑1 (MQ=255)
                                                           cTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTTCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGAc                                                                                             >  4:111191/1‑145 (MQ=255)
                                                            tCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCGCCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGa                                                                                         >  8:380796/1‑148 (MQ=255)
                                                            tCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGa                                                                                         >  6:292923/1‑148 (MQ=255)
                                                                  acaGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGAc                                                                                   >  5:177701/1‑148 (MQ=255)
                                                                    aGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAg                                                                                <  1:45657/149‑1 (MQ=255)
                                                                     gCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGt                                                                               <  7:152878/149‑1 (MQ=255)
                                                                       cgcgCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTa                                                                             <  2:114335/149‑1 (MQ=255)
                                                                       cgcgCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTa                                                                             <  7:336360/149‑1 (MQ=255)
                                                                            ccAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACg                                                                        >  3:149358/1‑149 (MQ=255)
                                                                              aGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCt                                                                      <  4:319060/149‑1 (MQ=255)
                                                                                gTAGGCGTGCAGGCACCGGCGGTCAGCGGTCGAAACCGACATGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGCGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTg                                                                     >  1:224179/1‑149 (MQ=255)
                                                                                gTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTg                                                                     >  2:186228/1‑148 (MQ=255)
                                                                                gTAGGCGTGCACGCACCCCCCGACACCGTCGAAACCGACCTGGCCAACGCCCTCACCCGGAAGATGCGCCCGGTGCAGACCGGCGGCGGCAGCACGTTTTCGAAATAGCAGCAAAAAATCCGACTACAAACGACTAGTTAGAACGATg                                                                     >  6:34532/1‑148 (MQ=255)
                                                                                  aGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCa                                                                   >  6:7052/1‑148 (MQ=255)
                                                                                      gTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGc                                                                                                            >  8:232690/1‑103 (MQ=255)
                                                                                      gTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATc                                                              >  1:358299/1‑149 (MQ=255)
                                                                                      gTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATc                                                              <  7:177031/149‑1 (MQ=255)
                                                                                         cAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCccggtgcctgcacgcctacctgggcgcggctgtggacgagggctagagacatgaacactccgttgttgctggaaaatgccgcttcctgc                                                           <  1:204812‑M2/149‑90 (MQ=255)
                                                                                         cAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCcac                                                           <  2:78901/149‑1 (MQ=255)
                                                                                          aGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCcaca                                                          <  7:366029/149‑1 (MQ=255)
                                                                                           ggCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCccggtgcctgcacgcctacctgggcgcggctgtggacgagggctagagacatgaacactccgttgttgctggaaaatgccgcttcctgcgg                                                         <  3:29876‑M2/149‑92 (MQ=255)
                                                                                            gCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCccggtgcctgcacgcctacctgggcgcggctgtggacgagggctagagacatgaacactccgttgttgctggaaaatgccgcttcctgcggc                                                        <  3:144446‑M2/149‑93 (MQ=255)
                                                                                             cACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATc                                                        >  8:274911/1‑148 (MQ=255)
                                                                                               ccGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCcac                                                           <  2:338212/143‑1 (MQ=255)
                                                                                               ccGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCcac                                                           >  1:338212/1‑143 (MQ=255)
                                                                                                cggcggTGAGCTTCGAAACGGACCTTGCCAACGGGCTGTGTGGGAAGTTGCGCCCGGTTTAGAGCTGCGGAGGGAGCAGGTTTTCGAAATATCTGAAAAAATTCGGAGTAGATACGAGTAGTTAGAACGCTGCAACATCCTCATCAAGc                                                    <  4:75742/149‑1 (MQ=255)
                                                                                                 ggcggTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCt                                                   >  6:406704/1‑149 (MQ=255)
                                                                                                 ggcggTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCt                                                   <  3:34374/149‑1 (MQ=255)
                                                                                                  gcggTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGa                                                                                    >  4:397367/1‑115 (MQ=255)
                                                                                                  gcggTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGa                                                                                    <  3:397367/115‑1 (MQ=255)
                                                                                                   cggTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCccggtgcctgcacgcctacctgggcgcggctgtggacgagggctagagacatgaacactccgttgttgctggaaaatgccgcttcctgcggctgggcaa                                                 >  4:144446‑M2/1‑50 (MQ=255)
                                                                                                     gTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAAt                                               <  3:348246/149‑1 (MQ=255)
                                                                                                        aGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATacc                                            <  4:149358/149‑1 (MQ=255)
                                                                                                              cGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTg                                                  <  6:155218/138‑1 (MQ=255)
                                                                                                              cGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTg                                                  >  5:155218/1‑138 (MQ=255)
                                                                                                                    cGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCAt                                 >  4:175586/1‑149 (MQ=255)
                                                                                                                     gACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCAtt                                <  5:292923/149‑1 (MQ=255)
                                                                                                                      aCCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCAttt                               >  1:209034/1‑149 (MQ=255)
                                                                                                                      aCCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCAttt                               <  5:7052/149‑1 (MQ=255)
                                                                                                                        cTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCAtttt                              >  6:295095/1‑148 (MQ=255)
                                                                                                                          ggCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATc                                                              <  5:330902/114‑1 (MQ=255)
                                                                                                                          ggCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATc                                                              >  6:330902/1‑114 (MQ=255)
                                                                                                                              aaCGGCCTGTCGGGGAAGTTTCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATg                       <  3:111191/149‑1 (MQ=255)
                                                                                                                                    ccTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGt                  <  2:358299/149‑1 (MQ=255)
                                                                                                                                           ggggAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAGGCa            <  3:305754/149‑1 (MQ=255)
                                                                                                                                            gggAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAGGCa            >  5:16974/1‑148 (MQ=255)
                                                                                                                                              gAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAGGCaaa          >  7:152741/1‑148 (MQ=255)
                                                                                                                                               aaGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAGGCaaaaa        <  2:185770/149‑1 (MQ=255)
                                                                                                                                                 gTTGCGCCCGGTGCAGAGCGTCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAGGCAAAAAGc      <  7:146648/149‑1 (MQ=255)
                                                                                                                                                    gcgcCCGGTGCAGAGCGGCGGGGGCAGCATGTTTTCGAAATAGCTGCAATAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATGAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAGGCAAAAAGCTa    <  5:34532/148‑1 (MQ=255)
                                                                                                                                                     cgcCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAGGCAAAAAGCTAGc  >  5:245074/1‑149 (MQ=255)
                                                                                                                                                       cccGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAGGCAAAAAGCTAg   >  3:15669/1‑146 (MQ=255)
                                                                                                                                                       cccGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAGGCAAAAAGCTAg   <  4:15669/146‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                                  
TTGCCCAGCCGCAGGAAGCGGCATTTTCCAGCAACAACGGAGTGTTCATGTCTCTAGCCCTCGTCCACAGCCGCGCCCAGGTAGGCGTGCAGGCACCGGCGGTCAGCGTCGAAACCGACCTGGCCAACGGCCTGTCGGGGAAGTTGCGCCCGGTGCAGAGCGGCGGCGGCAGCAGGTTTTCGAAATAGCTGCAAAAATTCGGACTAGATACGACTAGTTAGAACGCTGCAACATCCACATCAAGCTGAATACCACCTTGACCATTTTAAAAATGGCAGTCAGGCAAAAAGCTAGC  >  NC_002947/5971455‑5971749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.