| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 77240 | 89 (1.370) | 5 (0.080) | 5/256 | NT | 5.4% | coding (304/1311 nt) | rsmB | ribosomal RNA small subunit methyltransferase B |
| ? | NC_002947 | = 77271 | 88 (1.390) | coding (273/1311 nt) | rsmB | ribosomal RNA small subunit methyltransferase B | |||||
Only 100 of 107 total aligned reads displayed.
AGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGCTGTGCGGCCAGCAGGTCGAGGCGT > NC_002947/77095‑77388 | aGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑Gcaca > 8:199160/1‑149 (MQ=255)aGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑Gca > 2:57024/1‑147 (MQ=255) cgcCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGc > 2:71598/1‑149 (MQ=255) ccTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGcc > 7:326944/1‑148 (MQ=255) cTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCAc < 1:186003/147‑1 (MQ=255) tGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGt > 5:237057/1‑149 (MQ=255) cagccagcGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTAGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCATGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGtct > 6:4686/1‑149 (MQ=255) accgcgGGTGCGCGCTACGCACCACCGGGTCGCGCTCCATGCCCGCGACCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACCGCATTGAGCAGCCCCTACCCCCACGGCTTCATCAGTATGTCC‑‑‑‑‑ACACAGCCCACGGACTCGcc > 2:235700/3‑148 (MQ=255) gcgcGGGTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCccatgccgccatcggcgaga > 1:170749‑M1/1‑129 (MQ=255) ccggtggTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGa > 5:179080/6‑149 (MQ=255) cgcgGGTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGAt > 2:221500/1‑149 (MQ=255) gggTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATggc < 6:264301/149‑1 (MQ=255) gggTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATggc < 3:399286/149‑1 (MQ=255) gTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATggcgg < 5:362919/149‑1 (MQ=255) gcgcGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCa > 2:7425/1‑149 (MQ=255) cgcgGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCAt < 1:221500/149‑1 (MQ=255) gcgGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATg > 2:127807/1‑149 (MQ=255) cGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGgccg > 5:255611‑M2/1‑144 (MQ=255) cGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGgccg < 1:201377‑M2/148‑5 (MQ=255) gCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCGGCACAGCccatgccgccatcggcgagaccgtgggctgtg < 6:221686‑M1/149‑33 (MQ=255) gCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGa < 5:216589/149‑1 (MQ=255) gCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCGTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCgg > 5:240817/1‑148 (MQ=255) caccacCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGaa < 1:57024/149‑1 (MQ=255) accaccGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAAt > 5:359758/1‑149 (MQ=255) caccGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCccatgccgccatcggcgagaccgtgggctgtgccgacaaa < 5:410437‑M1/148‑41 (MQ=255) caccGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCccatgccgccatcggcgagaccgtgggctgtgccgacaaa > 6:410437‑M1/1‑108 (MQ=255) caccGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATgc < 7:199160/149‑1 (MQ=255) accGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATgcg < 2:201377/149‑1 (MQ=255) ccGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATgcgc < 6:237057/149‑1 (MQ=255) gggTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCccatgccgccatcggcgagaccgtgggctgtgccgacaaactgaa < 2:170749‑M1/149‑46 (MQ=255) gggTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCgt < 2:14801/149‑1 (MQ=255) gggTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCgt < 5:120769/149‑1 (MQ=255) cgcTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGaa < 3:332072/149‑1 (MQ=255) gcTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAAc > 5:375625/1‑149 (MQ=255) cTCCATGCCGGCGAGCAGCTCCTCGCCTTCGGCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGaa > 1:242835/1‑148 (MQ=255) ccATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGc > 2:108941/1‑149 (MQ=255) cATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCTATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCt < 1:108941/149‑1 (MQ=255) cATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGc < 2:19193/148‑1 (MQ=255) cATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCt > 2:218447/1‑149 (MQ=255) cATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCt < 8:165525/149‑1 (MQ=255) aTGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTg < 1:7425/149‑1 (MQ=255) aTGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTg < 8:326944/149‑1 (MQ=255) tGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTgg < 7:263504/149‑1 (MQ=255) cGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGTCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTAc < 7:81115/149‑1 (MQ=255) ggCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGCCCGGAATGCGCGTGTAGAACAGCTGGTACa < 1:35388/149‑1 (MQ=255) gCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACCGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGACTGCGCGTGTAGAACAGCTCGTACAg > 1:345205/1‑149 (MQ=255) gCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAg > 2:156788/1‑149 (MQ=255) gAGCAGCTCCTCGCCTTC‑GCGCTAGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCATGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGc < 5:4686/149‑1 (MQ=255) ctcGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTgg > 4:232754/1‑133 (MQ=255) ctcGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTgg < 3:232754/133‑1 (MQ=255) ctcGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACcagca < 6:179080/149‑1 (MQ=255) tcGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACcagcag > 5:243245/1‑149 (MQ=255) cTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGAGGCATGGGCCGGAATGCGCGTGTAGAACAGCAGCTACATGCCGACAagcagcagc > 2:106814/1‑149 (MQ=255) ttC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAgcg > 4:152782/1‑149 (MQ=255) gcgcTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCt < 6:359758/149‑1 (MQ=255) cTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGaa > 3:17471/1‑149 (MQ=255) gCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAAcatc < 1:71598/149‑1 (MQ=255) cGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAAcatcggc < 4:60979/149‑1 (MQ=255) ggCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCA‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAAcatcggca < 6:41853/149‑1 (MQ=255) aCGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGc < 4:17471/149‑1 (MQ=255) aCGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGc < 6:243245/149‑1 (MQ=255) gCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAAcatcg < 1:170673/135‑1 (MQ=255) gCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAAcatcg > 2:170673/1‑135 (MQ=255) aTTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTg > 4:72774/1‑148 (MQ=255) gCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGc > 8:128857/1‑149 (MQ=255) gCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGc > 4:288283/1‑149 (MQ=255) aGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCtt < 3:152782/149‑1 (MQ=255) aGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑ACACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCtt < 1:235700/149‑1 (MQ=255) gCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGaa > 8:302652/1‑141 (MQ=255) gCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGaa < 7:302652/141‑1 (MQ=255) gCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCtttt > 4:163594/1‑149 (MQ=255) cccTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTg < 5:109896/149‑1 (MQ=255) gCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGcagcag > 3:105677/1‑149 (MQ=255) ccACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGCt < 2:8422/149‑1 (MQ=255) aCGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAAcatcg > 6:227212/1‑113 (MQ=255) aCGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCtttt < 4:361111/138‑1 (MQ=255) aCGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCtttt > 3:361111/1‑138 (MQ=255) cGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAg < 6:260358/130‑1 (MQ=255) cGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAg > 5:260358/1‑130 (MQ=255) gCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGCTGTGCg > 7:329260/1‑149 (MQ=255) gCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGCTGTGCg < 3:163594/149‑1 (MQ=255) cttcttCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGATGTGCgg > 7:219116/1‑149 (MQ=255) ttcttcAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGaa > 1:216054/1‑68 (MQ=255) ttcttcAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGaa < 2:216054/68‑1 (MQ=255) ttcttcAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTgca > 5:146332/1‑136 (MQ=255) ttcttcAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTgca < 6:146332/136‑1 (MQ=255) cttcAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGCTGTGCGGc < 3:72774/147‑1 (MQ=255) ttcAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGgccgacaaactgaagaagccgtgggccaagggcctgctcaatgccgtgctgcgccgtgcccagcgcgaaggcgaggagctgctcgccggcatggagcgcgaccc < 2:170749‑M2/149‑105 (MQ=255) ttcAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGCTGTGCGGCcag > 8:285611/1‑149 (MQ=255) tcAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGCTGTGCGGCcag > 3:6024/1‑148 (MQ=255) cAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGGATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACGAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCtt < 7:377180/126‑1 (MQ=255) tttGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGgccgacaaactgaagaagccgtgggccaagggcctgctcaatgccgtgctgcgccgtgcccagcgcgaaggcgaggagctgctcgccggcatggagcgcgacccggtg < 5:410437‑M2/148‑109 (MQ=255) tttGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGgccgacaaactgaagaagccgtgggccaagggcctgctcaatgccgtgctgcgccgtgcccagcgcgaaggcgaggagctgctcgccggcatggagcgcgacccggtg > 6:410437‑M2/1‑40 (MQ=255) gTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGCTGTGCGGCCAGCAGGTc > 5:48145/1‑147 (MQ=255) gTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGCTGTGCGGCCAGCAGGTc > 5:42142/1‑147 (MQ=255) tCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGCTGTGCGGCCAGCAGGTCGAg < 4:6024/149‑1 (MQ=255) cG‑‑‑‑‑GCccatgccgccatcggcgagaccgtgggctgtgccgacaaactgaagaagccgtgggccaagggcctgctcaatgccgtgctgcgccgtgcccagcgcgaaggcgaggagctgctcgccggcatggagcgcgacccggtggtgcg > 5:255611‑M1/1‑4 (MQ=255) cG‑‑‑‑‑GCccatgccgccatcggcgagaccgtgggctgtgccgacaaactgaagaagccgtgggccaagggcctgctcaatgccgtgctgcgccgtgcccagcgcgaaggcgaggagctgctcgccggcatggagcgcgacccggtggtgcg < 1:201377‑M1/148‑145 (MQ=255) gCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGCTGTGCGGCCAGCAGGTCGAGGCg > 2:342788/1‑149 (MQ=255) cacaGCCCACGGTCTCGCCGATGGCGGCATGGgctgtgccgacaaactgaagaagccgtgggccaagggcctgctcaatgccgtgctgcgccgtgcccagcgcgaaggcgaggagctgctcgccggcatggagcgcgacccggtggtgc < 6:221686‑M2/149‑118 (MQ=255) | AGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGGCGAGCAGCTCCTCGCCTTC‑GCGCTGGGCACGGCGCAGCACGGCATTGAGCAGGCCCTTGGCCCACGGCTTCTTCAGTTTGTCG‑‑‑‑‑GCACAGCCCACGGTCTCGCCGATGGCGGCATGGGCCGGAATGCGCGTGTAGAACAGCTGGTACAGGCCGACCAGCAGCAGCGCCTGAACATCGGCATCGGCTGCCTTGAAGGGCTTTTGCAGCAGCTGTGCGGCCAGCAGGTCGAGGCGT > NC_002947/77095‑77388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |