New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1021094 =	50 (0.770)	3 (0.050)	3/252	NT	5.7%	coding (893/1011 nt)	dppB	dipeptide ABC transporter permease
	?	NC_002947	1021134 =	52 (0.840)					coding (853/1011 nt)	dppB	dipeptide ABC transporter permease

TGGAATCGGGCTAGTCATGGCAAGGGCCTCAGCGCTGATGACGGATGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACG  >  NC_002947/1020948‑1021240                                                                                                                                                   |                                                                                                                                                    tGGAATCGGGCTAGTCATGGCAAGGGCCTCAGCGCTGATGACGGATGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACgg                                                                                                                                                   >  3:321298/1‑149 (MQ=255)  ggAATCGGGCTAGTCATGGCAAGGGCCTCAGCGCTGATGACGGATGCGTGTGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTTGACCACGGTTTAGTCACgg                                                                                                                                                   <  4:133775/148‑1 (MQ=255)        gggCTAGTCATGGCAAGGGCCTCAGCGCTGATGACGGATGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGa                                                                                                                                            <  6:34795/149‑1 (MQ=255)         ggCTAGTCATGGCCACGGCCGCAGCCCTGATGACGGAGGCGCGGGCTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGAt                                                                                                                                           <  6:300450/149‑1 (MQ=255)         ggCTAGTCATGGCAAGGGCCTCAGCGCTGATGACGGATGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGAt                                                                                                                                           <  7:283425/149‑1 (MQ=255)              gTCATGGCAAGGGCCTCAGCGCTGATGACGGATGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGc                                                                                                                                        <  4:31640/147‑1 (MQ=255)                 aTGGCAAGGGCCTCAGCGCTGATGACGGATGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGa                                                                                                                                   <  1:21230/149‑1 (MQ=255)                  tGGCAAGGGGCTGAGCGCTGATGACGGATGCGTGTTTTGGCCAGGCCGTTGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGTCGATCAACAGGATGCCGTTCTTGACCACGGGGTAGTCACTGGCACCGATGGCTTCGAt                                                                                                                                  <  1:101279/149‑1 (MQ=255)                                      ttcgtccatggcctgcgcaatgcgctgatcccggtgctgaccgtgttcggcctgcaggtcggcacgctgctggccggtgcggtgctgaccgaaaccatcttttcctggcCGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGccc                                                                                                              >  2:188192‑M1/110‑148 (MQ=255)                                       tgaCGGATGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCg                                                                                                             <  1:391091/148‑1 (MQ=255)                                             aTGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGa                                                                                                      <  1:129088/149‑1 (MQ=255)                                              tGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGaa                                                                                                     <  1:86119/149‑1 (MQ=255)                                                 gTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGaa                                                                                                     >  2:53488/1‑146 (MQ=255)                                                  tGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGAGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGa                                                                                                 <  3:69067/149‑1 (MQ=255)                                                   gggTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGAt                                                                                                >  4:178229/1‑149 (MQ=255)                                                    ggTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATg                                                                                               <  7:377461/149‑1 (MQ=255)                                                    ggTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATg                                                                                               <  4:321298/149‑1 (MQ=255)                                                     gTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATgg                                                                                              >  1:174634/1‑149 (MQ=255)                                                     gTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGAACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATgg                                                                                              >  6:20731/1‑149 (MQ=255)                                                         gCCATGCCGTAGAGGATGTCCACGACGAAGTTGACCATAATCACCATGCAGGCGATCAACAGTATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTc                                                                                          <  2:174634/149‑1 (MQ=255)                                                         gCCAGGCCGTAGAGGATTTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCAC‑GGCACCGATGGCTTCGATCAGCCAATTTGCCGATGCCCGGCCAGGAAAAGATGGttt                                                                                           <  1:55111/148‑1 (MQ=255)                                                         gCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGttt                                                                                           <  3:178229/148‑1 (MQ=255)                                                           cAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCgg                                                                                        >  6:293479/1‑149 (MQ=255)                                                             ggCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTc                                                                                      <  5:293479/149‑1 (MQ=255)                                                                cGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGaaaa                                                                                                   >  6:414082/1‑133 (MQ=255)                                                                cGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGaaaa                                                                                                   <  5:414082/133‑1 (MQ=255)                                                                cGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAg                                                                                    >  2:340802/1‑148 (MQ=255)                                                                 gTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAgca                                                                                  <  7:169630/149‑1 (MQ=255)                                                                    gagGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATg                                                                                               <  4:376419/133‑1 (MQ=255)                                                                    gagGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATg                                                                                               >  3:376419/1‑133 (MQ=255)                                                                     agGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGaaaa                                                                                                   >  1:403635/1‑128 (MQ=255)                                                                     agGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGaaaa                                                                                                   <  2:403635/128‑1 (MQ=255)                                                                                   ttcggcctgcaggtcggcacgctgctggccggtgcggtgctgaccgaaaccatcttttcctggcCGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCg                                                                                                             >  8:154778‑M1/65‑104 (MQ=255)                                                                                   ttcggcctgcaggtcggcacgctgctggccggtgcggtgctgaccgaaaccatcttttcctggcCGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCg                                                                                                             <  7:154778‑M1/40‑1 (MQ=255)                                                                                      gTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGc                                                             <  1:340802/149‑1 (MQ=255)                                                                                          aCCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGcc                                                                                                                     <  5:87818/89‑1 (MQ=255)                                                                                          aCCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGcc                                                                                                                     >  6:87818/1‑89 (MQ=255)                                                                                          aCCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGAc                                                         >  2:199083/1‑149 (MQ=255)                                                                                            cAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCt                                                       >  3:403299/1‑149 (MQ=255)                                                                                                   aCCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGc                                                 <  4:403299/148‑1 (MQ=255)                                                                                                     caggcaggCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCg                                               >  4:390514/1‑148 (MQ=255)                                                                                                       ggcaggcGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGaa                                             >  7:190567/1‑148 (MQ=255)                                                                                                       ggcaggcGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAac                                            <  3:390514/149‑1 (MQ=255)                                                                                                          aggcGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGAACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACg                                         <  5:20731/149‑1 (MQ=255)                                                                                                              gATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCa                                     <  4:328407/149‑1 (MQ=255)                                                                                                                   aCAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAgc                                                                                   >  1:385454/1‑98 (MQ=255)                                                                                                                   aCAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAgc                                                                                   <  2:385454/98‑1 (MQ=255)                                                                                                                   aCAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCAcc                                >  1:74524/1‑149 (MQ=255)                                                                                                                         tGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATc                          <  5:66834/149‑1 (MQ=255)                                                                                                                              ttCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAg                        <  1:204526/146‑1 (MQ=255)                                                                                                                              ttCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAg                        >  2:204526/1‑146 (MQ=255)                                                                                                                                 tGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGAta                                                                                               >  6:374090/1‑71 (MQ=255)                                                                                                                                   gACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTgc                >  6:213111/1‑149 (MQ=255)                                                                                                                                           ggTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACATGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCa        >  1:97589/1‑149 (MQ=255)                                                                                                                                           ggTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCa        <  1:53488/149‑1 (MQ=255)                                                                                                                                                tCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGAc   <  1:199083/149‑1 (MQ=255)                                                                                                                                                  aCGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTACCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACg  >  4:243084/1‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                                    TGGAATCGGGCTAGTCATGGCAAGGGCCTCAGCGCTGATGACGGATGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACG  >  NC_002947/1020948‑1021240

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.