| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1021094 = | 50 (0.770) | 3 (0.050) | 3/252 | NT | 5.7% | coding (893/1011 nt) | dppB | dipeptide ABC transporter permease |
| ? | NC_002947 | 1021134 = | 52 (0.840) | coding (853/1011 nt) | dppB | dipeptide ABC transporter permease | |||||
ATGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCGGCGACAGGCCTTTGGCGC > NC_002947/1020992‑1021274 | aTGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGa < 1:129088/149‑1 (MQ=255) tGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGaa < 1:86119/149‑1 (MQ=255) gTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGaa > 2:53488/1‑146 (MQ=255) tGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGAGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGa < 3:69067/149‑1 (MQ=255) gggTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGAt > 4:178229/1‑149 (MQ=255) ggTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATg < 7:377461/149‑1 (MQ=255) ggTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATg < 4:321298/149‑1 (MQ=255) gTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATgg > 1:174634/1‑149 (MQ=255) gTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGAACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATgg > 6:20731/1‑149 (MQ=255) gCCATGCCGTAGAGGATGTCCACGACGAAGTTGACCATAATCACCATGCAGGCGATCAACAGTATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTc < 2:174634/149‑1 (MQ=255) gCCAGGCCGTAGAGGATTTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCAC‑GGCACCGATGGCTTCGATCAGCCAATTTGCCGATGCCCGGCCAGGAAAAGATGGttt < 1:55111/148‑1 (MQ=255) gCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGttt < 3:178229/148‑1 (MQ=255) cAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCgg > 6:293479/1‑149 (MQ=255) ggCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTc < 5:293479/149‑1 (MQ=255) cGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGaaaa < 5:414082/133‑1 (MQ=255) cGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGaaaa > 6:414082/1‑133 (MQ=255) cGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAg > 2:340802/1‑148 (MQ=255) gTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAgca < 7:169630/149‑1 (MQ=255) gagGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATg > 3:376419/1‑133 (MQ=255) gagGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATg < 4:376419/133‑1 (MQ=255) agGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGaaaa < 2:403635/128‑1 (MQ=255) agGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGaaaa > 1:403635/1‑128 (MQ=255) gTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGc < 1:340802/149‑1 (MQ=255) aCCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGAc > 2:199083/1‑149 (MQ=255) cAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCt > 3:403299/1‑149 (MQ=255) aCCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGc < 4:403299/148‑1 (MQ=255) caggcaggCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCg > 4:390514/1‑148 (MQ=255) ggcaggcGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGaa > 7:190567/1‑148 (MQ=255) ggcaggcGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAac < 3:390514/149‑1 (MQ=255) aggcGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGAACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACg < 5:20731/149‑1 (MQ=255) gATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCa < 4:328407/149‑1 (MQ=255) aCAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAgc < 2:385454/98‑1 (MQ=255) aCAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAgc > 1:385454/1‑98 (MQ=255) aCAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCAcc > 1:74524/1‑149 (MQ=255) tGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATc < 5:66834/149‑1 (MQ=255) ttCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAg < 1:204526/146‑1 (MQ=255) ttCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAg > 2:204526/1‑146 (MQ=255) tGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGAta > 6:374090/1‑71 (MQ=255) gACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTgc > 6:213111/1‑149 (MQ=255) ggTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACATGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCa > 1:97589/1‑149 (MQ=255) ggTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCa < 1:53488/149‑1 (MQ=255) tCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGAc < 1:199083/149‑1 (MQ=255) aCGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTACCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACg > 4:243084/1‑148 (MQ=255) cgggcatcggcaaatggctgatcgaagccatcggtgcccgGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGaa > 8:154778‑M2/41‑104 (MQ=255) cgggcatcggcaaatggctgatcgaagccatcggtgcccgGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGaa < 7:154778‑M2/64‑1 (MQ=255) gggcatcggcaaatggctgatcgaagccatcggtgcccgGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGaa > 2:188192‑M2/40‑148 (MQ=255) CACCGATGGCTTCGATCAACC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAacac < 7:67457‑M1/148‑1 (MQ=255) gATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACAACACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCacac > 1:319327/1‑149 (MQ=255) ttCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCg > 5:50806/1‑149 (MQ=255) cGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCgg < 2:74524/148‑1 (MQ=255) aTCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCGGCGa > 2:193131/1‑149 (MQ=255) gCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCGGCGACAgg > 7:179545/1‑149 (MQ=255) cc‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGAc > 6:238774/1‑123 (MQ=255) aTTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCGGCGACAGGCCt > 5:90329/1‑149 (MQ=255) aTTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCGGCGACAGGCCt > 5:277775/1‑149 (MQ=255) tttGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCGGCGACAGGCCtt > 5:82663/1‑149 (MQ=255) gCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTACCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCGGCGACAGGCCTTTg < 3:243084/148‑1 (MQ=255) ccGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCGGc < 1:108230/135‑1 (MQ=255) ccGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCGGc > 2:108230/1‑135 (MQ=255) ccGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCGGCGACAGGCCTTTGgc > 4:12080/1‑149 (MQ=255) gATGCCCGGCCAGGAAAAGATGGGTTCGGTCAGCACCGCACCGGGCAGCAGCGTGCCGACCTGCAGGCGGAACACGGGCAGGCGCGGGATCAGGGGATTGCGGCGGCCATGGCGGAGCACCACACGGGCCGGCGGCAGGCGTGTGgcgc > 8:273893/1‑149 (MQ=255) | ATGCGTGGGTTGGCCAGGCCGTAGAGGATGTCCACGACGAAGTTGACCAGAATCACCAGGCAGGCGATCAACAGGATGCCGTTCTGGACCACGGGGTAGTCACGGGCACCGATGGCTTCGATCAGCC‑ATTTGCCGATGCCCGGCCAGGAAAAGATGGTTTCGGTCAGCACCGCACCGGCCAGCAGCGTGCCGACCTGCAGGCCGAACACGGTCAGCACCGGGATCAGCGCATTGCGCAGGCCATGGACGAACACCACACGGGCCGGCGACAGGCCTTTGGCGC > NC_002947/1020992‑1021274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |