New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2090572 =	78 (1.200)	4 (0.060)	4/252	NT	5.7%	intergenic (+249/‑103)	PP_1867/deaD	hypothetical protein/ATP‑dependent DEAD‑box RNA helicase DeaD
	?	NC_002947	2090654 =	59 (0.950)					intergenic (+331/‑21)	PP_1867/deaD	hypothetical protein/ATP‑dependent DEAD‑box RNA helicase DeaD

TTTTCCTCACGTACGCGACTATTTCAGGTATAGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCGGCGGCTTCGCCGCTCTCGATCTTAAC  >  NC_002947/2090425‑2090716                                                                                                                                                     |                                                                                                                                                  ttttCCTCACGTACGCGACTATTTCAGGTATAGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCg                                                                                                                                                  <  3:352479/149‑1 (MQ=255) cggcgaggatgatcgggatcgattgttgctgaatggcggacggctcttcgtagccggtagccacaacggcagcaacaatgttcgggttaagatcgagagcggcgaagccgccggtttcctgggtcatgggtctgcctctaggtgcatcc                                                                                                                                                   <  6:107707‑M1/1‑1 (MQ=255)      aggatgatcgggatcgattgttgctgaatggcggacggctcttcgtagccggtagccacaacggcagcaacaatgttcgggttaagatcgagagcggcgaagccgccggtttcctgggtcatgggtctgcctctaggtgcatcCGCaaa                                                                                                                                              >  4:193535‑M1/144‑149 (MQ=255)       tCACGTACGCGACTATTTCAGGTATAGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTGTTTTTCAATAGTTTTATCaaaa                                                                                                                                             >  2:196667/1‑147 (MQ=255)       tCACGTACGCGACTATTTCAGGTATAGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATc                                                                                                                                            >  4:171671/1‑149 (MQ=255)         aCGTACGCGACTATTTCAGGTATAGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATccc                                                                                                                                          >  6:338891/1‑149 (MQ=255)          cGTACGAGACTATTTCAGGTATAGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATcccc                                                                                                                                         >  8:176730/1‑149 (MQ=255)                   cTATTTCAGGTATAGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCaaa                                                                                                                               <  8:221678/149‑1 (MQ=255)                      attgttgctgaatggcggacggctcttcgtagccggtagccacaacggcagcaacaatgttcgggttaagatcgagagcggcgaagccgccggtttcctgggtcatgggtctgcctctaggtgcatcCGCaaa                                                                                                                                              >  5:294502‑M1/128‑133 (MQ=255)                      attgttgctgaatggcggacggctcttcgtagccggtagccacaacggcagcaacaatgttcgggttaagatcgagagcggcgaagccgccggtttcctgggtcatgggtctgcctctaggtgcatcCGCaaa                                                                                                                                              <  6:294502‑M1/6‑1 (MQ=255)                          aGGTATAGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCt                                                                                                                        <  6:199202/149‑1 (MQ=255)                          aGGTATAGTACGCGCCGGGCTTTTAGCTGGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGcc                                                                                                                         >  1:18869/1‑149 (MQ=255)                             tataGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAAt                                                                                                                                             >  4:119110/1‑126 (MQ=255)                             tataGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAAt                                                                                                                                             <  3:119110/126‑1 (MQ=255)                               taGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGt                                                                                                                    <  3:93793/148‑1 (MQ=255)                                aGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTg                                                                                                                   <  3:118332/148‑1 (MQ=255)                                 gTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGa                                                                                                                  <  5:338891/148‑1 (MQ=255)                                  tACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGAcc                                                                                                                <  8:104278/149‑1 (MQ=255)                                  tACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGAcc                                                                                                                >  8:3726/1‑149 (MQ=255)                                     gcgcCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGa                                                                                                             >  4:172457/1‑149 (MQ=255)                                       gcCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACg                                                                                                           <  3:172457/149‑1 (MQ=255)                                         cGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGt                                                                                                         <  5:127196/149‑1 (MQ=255)                                          ggTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCACAAGTTTTCTTTTTCAATAGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTc                                                                                                        >  1:262476/1‑149 (MQ=255)                                                ttAGC‑GGAGCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTGTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTc                                                                                                    <  8:29655/147‑1 (MQ=255)                                                ttAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCttt                                                                                                     <  5:149312/146‑1 (MQ=255)                                                ttAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTc                                                                                                    <  5:352910/147‑1 (MQ=255)                                                ttAGA‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTc                                                                                                    <  6:326617/147‑1 (MQ=255)                                                  aGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAg                                                                                                 <  7:176730/148‑1 (MQ=255)                                                      ggACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCAt                                                                                             >  6:370752/1‑149 (MQ=255)                                                       gACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCAtg                                                                                            >  5:23387/1‑149 (MQ=255)                                                        aCCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCAtgt                                                                                           <  8:305294/149‑1 (MQ=255)                                                            cAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAg                                                                                       >  3:328369/1‑149 (MQ=255)                                                             aaaaTCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCcgc‑cgc                                                                                                                                   >  3:392816/1‑104 (MQ=255)                                                             aaaaTCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCcgc‑cgc                                                                                                                                   <  4:392816/104‑1 (MQ=255)                                                                  acggcagcaacaatgttcgggttaagatcgagagcggcgaagccgccggtttcctgggtcatgggtctgcctctaggtgcatcCGCAAAGACCCATGCTCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTg                                                                                  >  5:107707‑M1/84‑149 (MQ=255)                                                                   aGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGa                                                                                <  8:70076/149‑1 (MQ=255)                                                                    ggtggtGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAg                                                                               <  2:18869/149‑1 (MQ=255)                                                                      tggtgCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCa                                                                             <  4:328369/149‑1 (MQ=255)                                                                       agcaacaatgttcgggttaagatcgagagcggcgaagccgccggtttcctgggtcatgggtctgcctctaggtgcatcCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCAt                                                                            >  3:353224‑M1/79‑149 (MQ=255)                                                                        ttgCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCAt                                                                            <  4:66749/147‑1 (MQ=255)                                                                               tcctccGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCttt                                                                    <  1:196667/149‑1 (MQ=255)                                                                               tcctccGAGGCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCttt                                                                    <  3:371307/149‑1 (MQ=255)                                                                                cctccGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTg                                                                   >  4:336171/1‑149 (MQ=255)                                                                                 ctccGAGTCCAGCTTCGTCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGc                                                                  <  3:98281/149‑1 (MQ=255)                                                                                  tccGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGa                                                                                <  8:104039/134‑1 (MQ=255)                                                                                  tccGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGa                                                                                >  7:104039/1‑134 (MQ=255)                                                                                  tccGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCg                                                                 >  2:350603/1‑149 (MQ=255)                                                                                  tccGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCg                                                                 >  2:387117/1‑149 (MQ=255)                                                                                        tCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCa                                                           >  5:329022/1‑149 (MQ=255)                                                                                          cAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCAcc                                                         >  3:103616/1‑149 (MQ=255)                                                                                          cAGCTTCGGATGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATGCCAGC‑CGCCAAAGATGCATGGGTGACCTGACGGTCTTTAAAGGCAGGTGCAGCTTTGGAGCATGGGTCTTTGCGGATgaccc                                                         >  2:148067/1‑145 (MQ=255)                                                                                              ttCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGAc                                                                                                                 >  7:380597/1‑89 (MQ=255)                                                                                              ttCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGAc                                                                                                                 <  8:380597/89‑1 (MQ=255)                                                                                                cGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTaga                                                     <  6:329022/147‑1 (MQ=255)                                                                                                  gCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAgg                                                   >  5:46684/1‑147 (MQ=255)                                                                                                   cTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCCCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAg                                                >  6:126741/1‑149 (MQ=255)                                                                                                       gcgTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGAccc                                            <  6:27948/149‑1 (MQ=255)                                                                                                       gcgTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGAcc                                             >  6:373089/1‑148 (MQ=255)                                                                                                         gTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCAt                                          <  1:387117/149‑1 (MQ=255)                                                                                                            cGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGa                                        <  2:262476/148‑1 (MQ=255)                                                                                                             gCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGAcc                                      <  5:373089/149‑1 (MQ=255)                                                                                                             cgccggtttcctgggtcatgggtctgcctctaggtgcatcCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGa                                                               >  8:246303‑M1/41‑124 (MQ=255)                                                                                                             cgccggtttcctgggtcatgggtctgcctctaggtgcatcCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGa                                                               <  7:246303‑M1/84‑1 (MQ=255)                                                                                                                 ggCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCa                                    <  5:370752/147‑1 (MQ=255)                                                                                                                 ggCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCa                                    <  6:23387/147‑1 (MQ=255)                                                                                                                        cTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACcgg                           >  5:316856/1‑149 (MQ=255)                                                                                                                        cTTCCCAAGTTTTCGTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATTGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACagg                           >  2:217898/1‑149 (MQ=255)                                                                                                                         ttCCCAAGTTTTCTTTTTCAATCGTTTTCGCAATTCCCCGC‑CGCCAAAGCTGCGTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGTGCATGGGTCTTTGGGGATGCACCTAGATGCAGACCCATGACCCAGGAAACcggc                          <  1:217898/149‑1 (MQ=255)                                                                                                                           cccAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCTTGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACcggc                          <  3:171671/147‑1 (MQ=255)                                                                                                                           cccAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACcggc                          <  6:204061/147‑1 (MQ=255)                                                                                                                            ccAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGAGGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCggcggc                       >  5:17071/1‑149 (MQ=255)                                                                                                                             cAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCGGCGGCt                      >  1:217594/1‑149 (MQ=255)                                                                                                                               aGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTTGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCGGCGGCTTc                    <  3:194483/149‑1 (MQ=255)                                                                                                                               aGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCGGCGGCTTc                    <  8:263583/149‑1 (MQ=255)                                                                                                                                 ttttCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGt                                                                        >  1:134500/1‑95 (MQ=255)                                                                                                                                 ttttCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGt                                                                        <  2:134500/95‑1 (MQ=255)                                                                                                                                      tttttCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCGGCGGCTTCGCCGctc             >  7:176705/1‑149 (MQ=255)                                                                                                                                        tttCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACTGGCGGCTTCGCCGctct            <  3:336171/148‑1 (MQ=255)                                                                                                                                          tCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACACATGACCCAGGAAACCGGCGGCTTCGCCGCTCTCGa         >  2:288446/1‑149 (MQ=255)                                                                                                                                           cAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGc                                                  >  6:77428/1‑107 (MQ=255)                                                                                                                                           cAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGc                                                  <  5:77428/107‑1 (MQ=255)                                                                                                                                            aaTCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGa                                                                                <  6:284878/76‑1 (MQ=255)                                                                                                                                            aaTCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCGGCGGCTTCGCCGCTCTCGATc       >  8:282474/1‑149 (MQ=255)                                                                                                                                            aaTCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGAACTGACGGTCTTTCAAGGCATGTGCAGCTTTGGa                                                                                >  5:284878/1‑76 (MQ=255)                                                                                                                                             aTCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCGGCGGCTTCGCCGctc             >  5:154983/1‑142 (MQ=255)                                                                                                                                             aTCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCGGCGGCTTCGCCGctc             <  6:154983/142‑1 (MQ=255)                                                                                                                                              tCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCGGCGGCTTCGCCGCTCTCGATCt      >  3:54146/1‑148 (MQ=255)                                                                                                                                                 ttttCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCAt                                                                            >  5:371961/1‑75 (MQ=255)                                                                                                                                                 ttttCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCAt                                                                            <  6:371961/75‑1 (MQ=255)                                                                                                                                                 ttttCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCGGCGGCTTCGCCGCTCTCGATCTTAAc  >  6:224515/1‑149 (MQ=255)                                                                                                                                                 ttttCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCGGCGGCTTCGCCGCTATCGATCTTaa   >  4:294086/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                  TTTTCCTCACGTACGCGACTATTTCAGGTATAGTACGCGCCGGTCTTTTAGC‑GGACCTCAAAATCAGGTGGTGCAAATCCTCCGAGTCCAGCTTCGGCTGCGCGTCCGCTAGGCGGACCTTCCCAAGTTTTCTTTTTCAATCGTTTTCGCAAATCCCCGC‑CGCCAAAGCTGCCTGGGTGACCTGACGGTCTTTCAAGGCATGTGCAGCTTTGGAGCATGGGTCTTTGCGGATGCACCTAGAGGCAGACCCATGACCCAGGAAACCGGCGGCTTCGCCGCTCTCGATCTTAAC  >  NC_002947/2090425‑2090716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.