New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2269992	36 (0.550)	3 (0.050)	3/248	NT	7.4%	coding (795/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase
	?	NC_002947	= 2270034	41 (0.670)					coding (837/1212 nt)	metZ	O‑succinylhomoserine sulfhydrylase

ACCAAGTTCATCGACGGCCAGGGCCGCTGCATGGGCGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCACCCGCAGCACGAACTGGCCAAGCGCCAGAT  >  NC_002947/2269849‑2270135                                                                                                                                                |                                                                                                                                                accaAGTTCATCGACGGCCAGGGCCGCTGCATGGGCGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAAc                                                                                                                                            >  5:92216/1‑149 (MQ=255)  ccaANTTCATCGACGGCCAGGGCCGCTGCATGGGCGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACg                                                                                                                                           >  5:172152/1‑149 (MQ=255)         cATCGACGGCCAGGGCCGCTGCATGGGCGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGcc                                                                                                                                    >  4:361517/1‑149 (MQ=255)          atagACGGCCATGGCAGCTGAATGGGAGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGTGTTTCCTGCGAACAGCAGGTCAAACCCTCAGCCCGTGCAACGCCTGGAGCTTCACAAAGGGCAGGGAAACGCTGCGCCt                                                                                                                                   >  6:403497/4‑149 (MQ=255)          aTCGACGGCCAGGGCCGCTGCATGGGCGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCt                                                                                                                                   <  1:277423/149‑1 (MQ=255)           tCGACGGCCAGGGCCGCTGCATGGGCGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTg                                                                                                                                  >  5:220507/1‑149 (MQ=255)              aCGGCCAGGGCCGCTGCATGGGCGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGc                                                                                                                                 >  2:298635/1‑147 (MQ=255)              aCGGCCAGGGCCGCTGCATGGGCGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGc                                                                                                                                 <  1:298635/147‑1 (MQ=255)              aCGGCCAGGGCCGCTGCATGGGCGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCg                                                                                                                                >  2:381031/1‑148 (MQ=255)                  ccAGGGCCGCTGCATGGGCGGTGTGGTTGCCGTCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTAtgc                                                                                                                           <  6:288016/149‑1 (MQ=255)                  ccAGGGCCGCTGCATGGGCGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTAtgc                                                                                                                           >  4:178030/1‑149 (MQ=255)                        ccGCTGCATGGGCGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTAtgcgtgcg                                                                                                                      >  8:45486/1‑148 (MQ=255)                                            ttGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTcaggcc                                                                                                 >  3:361517‑M2/1‑143 (MQ=255)                                               ccggccgTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGagcgctttcgcagtgcgcacgcatacgcaggcgcagcgtttccaggccct                                                                                               <  4:179809‑M1/148‑51 (MQ=255)                                               ccggccgTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTcaggccct                                                                                               >  6:92216‑M2/1‑140 (MQ=255)                                               ccggccgTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTg                                                                                              <  1:136194/149‑1 (MQ=255)                                               ccggccgTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTg                                                                                              >  8:166837/1‑149 (MQ=255)                                                cggccgTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTgg                                                                                             >  4:308829/1‑149 (MQ=255)                                                cggccgTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTgg                                                                                             <  4:71843/149‑1 (MQ=255)                                                 ggccgTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGc                                                                                            <  7:166837/149‑1 (MQ=255)                                                           atgaaaTGATAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTg                                                                                  <  8:364823/146‑1 (MQ=255)                                                           aGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGc                                                                                    <  1:381031/147‑1 (MQ=255)                                                              aaaTGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGag                                                                               <  7:45486/149‑1 (MQ=255)                                                                   aaaGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAgcagca                                                                          <  6:339784/149‑1 (MQ=255)                                                                     agaagTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAgg                                                                        >  7:2803/1‑149 (MQ=255)                                                                               ggTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGCCGGCGtaat                                                              >  6:231361/1‑146 (MQ=255)                                                                                 tttCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGgag                                                             >  2:244751/1‑148 (MQ=255)                                                                                 tttCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGgag                                                             >  4:251751/1‑148 (MQ=255)                                                                                        cGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGc                                                      <  3:178030/148‑1 (MQ=255)                                                                                              gCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGc                                               >  3:1108/1‑149 (MQ=255)                                                                                                aGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCg                                             <  1:244751/149‑1 (MQ=255)                                                                                                       aCCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGcc                                      <  6:131084/149‑1 (MQ=255)                                                                                                       aCCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGcc                                      <  6:220507/149‑1 (MQ=255)                                                                                                                ccGTTCAACGCCTGGATCTTCACCAAGGGCCTGagcgctttcgcagtgcgcacgcatacgcaggcgcagcgtttccaggcccttg                                                                                             <  7:323203‑M1/85‑53 (MQ=255)                                                                                                                ccGTTCAACGCCTGGATCTTCACCAAGGGCCTGagcgctttcgcagtgcgcacgcatacgcaggcgcagcgtttccaggcccttg                                                                                             >  8:323203‑M1/1‑33 (MQ=255)                                                                                                                 cGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCACCCg                            <  1:72957/149‑1 (MQ=255)                                                                                                                   ttCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCACCCgca                          <  1:75592/149‑1 (MQ=255)                                                                                                                              gATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCACCCGCAGCACGAACTgg               <  6:90269/149‑1 (MQ=255)                                                                                                                                     aCCAACGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCACCCGCAGCACGAACTGGCCAAgc         <  4:368693/148‑1 (MQ=255)                                                                                                                                       cAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTcaggcccttggtgaagatccaggcgttgaacgg                                                                      >  8:323203‑M2/1‑52 (MQ=255)                                                                                                                                       cAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTcaggcccttggtgaagatccaggcgttgaacgg                                                                      <  7:323203‑M2/85‑34 (MQ=255)                                                                                                                                       cAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCACCCGCAGCACTAACTGGCCAAgcgc       >  8:278338/1‑148 (MQ=255)                                                                                                                                       cAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCACCCGCAGCACGAACTGGCCAAgcgc       >  7:308607/1‑148 (MQ=255)                                                                                                                                         aGGGCCTGagcgctttcgcagtgcgcacgcatacgcaggcgcagcgtttccaggcccttggtgaagatccaggcgttgaacgggctgagggttggacctgcggttcgcaggaaacccaccacttctttcatttgctcagtacggccgg     >  6:92216‑M1/1‑8 (MQ=255)                                                                                                                                         aGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTcaggcccttggtgaagatccaggcgttgaacgggctgagggttggacctgcggttcgcaggaaacccaccacttctttcatttgctcagtacggccgg     <  4:179809‑M2/148‑99 (MQ=255)                                                                                                                                          gggCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCACCCGCAGCACGAACTGGCCAAGCGCCAGa   <  6:172152/149‑1 (MQ=255)                                                                                                                                           ggCCTGagcgctttcgcagtgcgcacgcatacgcaggcgcagcgtttccaggcccttggtgaagatccaggcgttgaacgggctgagggttggacctgcggttcgcaggaaacccaccacttctttcatttgctcagtacggccggcaa  >  3:361517‑M1/1‑6 (MQ=255)                                                                                                                                             ccTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCAcc                              >  1:240109/1‑119 (MQ=255)                                                                                                                                             ccTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCAcc                              <  2:233891/119‑1 (MQ=255)                                                                                                                                             ccTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCAcc                              <  2:240109/119‑1 (MQ=255)                                                                                                                                             ccTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCAcc                              >  1:233891/1‑119 (MQ=255)                                                                                                                                                |                                                                                                                                                ACCAAGTTCATCGACGGCCAGGGCCGCTGCATGGGCGGTGTGGTTGCCGGCCGTACTGAGCAAATGAAAGAAGTGGTGGGTTTCCTGCGAACCGCAGGTCCAACCCTCAGCCCGTTCAACGCCTGGATCTTCACCAAGGGCCTGGAAACGCTGCGCCTGCGTATGCGTGCGCACTGCGAAAGCGCTCAGGCCCTGGCCGAATGGCTGGAGCAGCAGGACGGCGTGGAGAAGGTGCATTACGCCGGCCTGCCCAGCCACCCGCAGCACGAACTGGCCAAGCGCCAGAT  >  NC_002947/2269849‑2270135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.